RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.32□□□□□ -0.76
SLIRP-212ENST00000613856 ZNF703Q9H7S9 590 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-212ENST00000613856 C20orf141Q9NUB4 165 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 B4GALT7Q9UBV7 327 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 REV1Q9UBZ9 1251 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 CHRNA9Q9UGM1 479 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 DKKL1Q9UK85 242 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 VDAC3Q9Y277 283 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 SPIN1Q9Y657 262 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-212ENST00000613856 POLEQ07864 2286 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 KIAA1549Q9HCM3 1950 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 SVILO95425 2214 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 SETD2Q9BYW2 2564 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-212ENST00000613856 TRAV36DV7A0A075B6V5 113 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 TRAV17A0A0B4J275 112 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 PINLYPA6NC86 204 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 A8MVM7 634 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 KLRC4-KLRK1H3BQV0 150 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 KPNA4O00629 521 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-212ENST00000613856 CDC42EP2O14613 210 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 DENRO43583 198 aaKnown RBP10.31□□□□□ -0.76
SLIRP-212ENST00000613856 FZD7O75084 574 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 GLSO94925 669 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-212ENST00000613856 TP53P04637 393 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-212ENST00000613856 POU2F1P14859 743 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 HK1P19367 917 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 MAKP20794 623 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 GPR4P46093 362 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 SLC9A3P48764 834 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 RPS6KA3P51812 740 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 GPR85P60893 370 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 IL18R1Q13478 541 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 KEAP1Q14145 624 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 TAF11Q15544 211 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 ZNF74Q16587 644 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.31□□□□□ -0.765e-7■■■■□ 21.9
SLIRP-212ENST00000613856 ZIK1Q3SY52 487 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-212ENST00000613856 ZNF766Q5HY98 468 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 C6orf52Q5T4I8 152 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 RPL13AP3Q6NVV1 102 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 C3orf33Q6P1S2 294 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 ZNF620Q6ZNG0 422 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 USP51Q70EK9 711 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 SLC46A3Q7Z3Q1 461 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 GALNTL5Q7Z4T8 443 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 CHERPQ8IWX8 916 aaKnown RBP10.31□□□□□ -0.76
SLIRP-212ENST00000613856 SLC43A2Q8N370 569 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 ZFP62Q8NB50 900 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-212ENST00000613856 ZNF555Q8NEP9 628 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 JSRP1Q96MG2 331 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-212ENST00000613856 GNRHR2Q96P88 292 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 NPAS1Q99742 590 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 HES7Q9BYE0 225 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 RIBC2Q9H4K1 309 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 SERINC1Q9NRX5 453 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 FAM118AQ9NWS6 357 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 QPCTLQ9NXS2 382 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 LRCH1Q9Y2L9 728 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 CSAG2Q9Y5P2 127 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 CDH10Q9Y6N8 788 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 DCHS2Q6V1P9 2916 aa10.31□□□□□ -0.76
SLIRP-212ENST00000613856 UNC119BA6NIH7 251 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 EFCAB9A8MZ26 197 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 ZIC3O60481 467 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 ZG16O60844 167 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 OR7A10O76100 309 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 MT-ATP6P00846 226 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 HPNP05981 417 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 PTNP21246 168 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 CHMP24386 653 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 CLK1P49759 484 aaKnown RBP10.3□□□□□ -0.76
SLIRP-212ENST00000613856 MEOX1P50221 254 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 CRISP1P54107 249 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 IL1RL1Q01638 556 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 ANKDD1AQ495B1 522 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 C1orf140Q5VVS0 124 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 KIF18BQ86Y91 864 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 MCEMP1Q8IX19 187 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 ZADH2Q8N4Q0 377 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 CYGBQ8WWM9 190 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 DDIT4LQ96D03 193 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 HRASLS5Q96KN8 279 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 PIGQQ9BRB3 760 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 PTDSS2Q9BVG9 487 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 POTEKPQ9BYX7 375 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 TTTY12Q9BZ98 90 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 FKRPQ9H9S5 495 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 SLC25A19Q9HC21 320 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 KLHL1Q9NR64 748 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 IL20Q9NYY1 176 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 NDRG4Q9ULP0 352 aaKnown RBP10.3□□□□□ -0.76
SLIRP-212ENST00000613856 ZNF337Q9Y3M9 751 aa10.3□□□□□ -0.76
SLIRP-212ENST00000613856 LOC100130705A0A1B0GUX0 176 aa10.29□□□□□ -0.76
SLIRP-212ENST00000613856 ZC3H12DA2A288 527 aaKnown RBP10.29□□□□□ -0.76
SLIRP-212ENST00000613856 OR2M5A3KFT3 312 aa10.29□□□□□ -0.76
SLIRP-212ENST00000613856 ZAR1LA6NP61 321 aa10.29□□□□□ -0.76
SLIRP-212ENST00000613856 LINC01387J3KSC0 135 aa10.29□□□□□ -0.76
SLIRP-212ENST00000613856 BCKDKO14874 412 aa10.29□□□□□ -0.76
SLIRP-212ENST00000613856 OR2T1O43869 369 aa10.29□□□□□ -0.76
SLIRP-212ENST00000613856 EFNA2O43921 213 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms