RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 DLL1O00548 723 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 HYAL3O43820 417 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 SPDEFO95238 335 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 GYPBP06028 91 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 IGFBP1P08833 259 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 TRAPPC2P0DI81 140 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 TRAPPC2BP0DI82 140 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 CCR5P51681 352 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 DEFB109BQ30KR1 87 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 PGBD2Q6P3X8 592 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 OR51G2Q8NGK0 314 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 OR5L2Q8NGL0 311 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 OR4K13Q8NH42 304 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 UPRTQ96BW1 309 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 FAM46AQ96IP4 442 aaKnown RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 PIGUQ9H490 435 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 IFT22Q9H7X7 185 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ZSCAN32Q9NX65 697 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 FBXL2Q9UKC9 423 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 NPIPA1Q9UND3 350 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 MRPS2Q9Y399 296 aaKnown RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 FNDC1Q4ZHG4 1894 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 MN1Q10571 1320 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 GFYI3L273 518 aa10.02□□□□□ -0.8
FAM3A-221ENST00000612856 NME1P15531 152 aaKnown RBP10.02□□□□□ -0.8
FAM3A-221ENST00000612856 KLHL24Q6TFL4 600 aa10.02□□□□□ -0.8
FAM3A-221ENST00000612856 TCTE3Q8IZS6 198 aa10.02□□□□□ -0.8
FAM3A-221ENST00000612856 GABRG3Q99928 467 aa10.02□□□□□ -0.8
FAM3A-221ENST00000612856 BARHL1Q9BZE3 327 aa10.02□□□□□ -0.8
FAM3A-221ENST00000612856 GLIPR2Q9H4G4 154 aa10.02□□□□□ -0.8
FAM3A-221ENST00000612856 SLC17A4Q9Y2C5 497 aa10.02□□□□□ -0.8
FAM3A-221ENST00000612856 A0A0A6YYJ9 748 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 TTLL8A6PVC2 850 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 HRO43593 1189 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 CBX5P45973 191 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 CAPZBP47756 277 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 PRKXP51817 358 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 TGIF1Q15583 401 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 TRIP6Q15654 476 aaKnown RBP10.02□□□□□ -0.81
FAM3A-221ENST00000612856 TUSC1Q2TAM9 212 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 LRRN1Q6UXK5 716 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 UCN3Q969E3 161 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 POLDIP3Q9BY77 421 aaKnown RBP10.02□□□□□ -0.81
FAM3A-221ENST00000612856 DPH1Q9BZG8 443 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 TXNL4BQ9NX01 149 aaKnown RBP10.02□□□□□ -0.81
FAM3A-221ENST00000612856 TAS2R7Q9NYW3 318 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 EMC3Q9P0I2 261 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 ENOPH1Q9UHY7 261 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 TO15178 435 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 CASC3O15234 703 aaKnown RBP10.02□□□□□ -0.81
FAM3A-221ENST00000612856 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
FAM3A-221ENST00000612856 GINS1Q14691 196 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 XKR7Q5GH72 579 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 C3P1Q6ZMU1 363 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 LANCL3Q6ZV70 420 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 BTN2A1Q7KYR7 527 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 SLC30A8Q8IWU4 369 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 ANKRD53Q8N9V6 530 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 TSEN15Q8WW01 171 aaKnown RBP10.02□□□□□ -0.81
FAM3A-221ENST00000612856 APH1BQ8WW43 257 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 BTBD2Q9BX70 525 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.02□□□□□ -0.81
FAM3A-221ENST00000612856 DNAH14Q0VDD8 3507 aa10.02□□□□□ -0.81
FAM3A-221ENST00000612856 PLA2G10O15496 165 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 TLX3O43711 291 aaPredicted RBP10.01□□□□□ -0.81
FAM3A-221ENST00000612856 PRAMEF2O60811 474 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 DBIP07108 87 aaKnown RBP10.01□□□□□ -0.81
FAM3A-221ENST00000612856 ACSM4P0C7M7 580 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 HLA-DMAP28067 261 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 SOX2P48431 317 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 CCR6P51684 374 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 PPP3R1P63098 170 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 SLC14A1Q13336 389 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 ATXN7L3Q14CW9 347 aaPredicted RBP10.01□□□□□ -0.81
FAM3A-221ENST00000612856 ARL9Q6T311 187 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 DNAJB8Q8NHS0 232 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF285Q96NJ3 590 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 ACTRT3Q9BYD9 372 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 SEMA4GQ9NTN9 838 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 PLA2G3Q9NZ20 509 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 FAM183AA6NL82 134 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 DISC1C4P0D8 188 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 MASP2O00187 686 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 SSX5O60225 188 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 KHDRBS3O75525 346 aaKnown RBP10.01□□□□□ -0.81
FAM3A-221ENST00000612856 IGHV4-34P06331 123 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 ACVR2AP27037 513 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 AKR1C2P52895 323 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 CRISP1P54107 249 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 AKR1C1Q04828 323 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 TEX19Q8NA77 164 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 MS4A6EQ96DS6 147 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 THOC3Q96J01 351 aaKnown RBP10.01□□□□□ -0.81
FAM3A-221ENST00000612856 TSNAXQ99598 290 aaKnown RBP10.01□□□□□ -0.81
FAM3A-221ENST00000612856 OR10A4Q9H209 315 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 ABCA2Q9BZC7 2435 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 NOTCH4Q99466 2003 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 ATG12O94817 140 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 RHCEP18577 417 aa10.01□□□□□ -0.81
FAM3A-221ENST00000612856 STAT5AP42229 794 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms