RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CXCL2P19875 107 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 NANOS3P60323 173 aaKnown RBP18.76■□□□□ 0.59
SSBP3-216ENST00000610401 PLAURQ03405 335 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 HTR4Q13639 388 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 IDO2Q6ZQW0 420 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 BTN2A1Q7KYR7 527 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 SLC35F2Q8IXU6 374 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 TAS2R10Q9NYW0 307 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 PHF11Q9UIL8 331 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 MEIKINA0A087WXM9 373 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 PIN1P1O15428 100 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 NFATC1O95644 943 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 UBL4AP11441 157 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 TYRP1P17643 537 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 TNFRSF17Q02223 184 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 SQSTM1Q13501 440 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 ARHGAP11BQ3KRB8 267 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 TMPRSS12Q86WS5 348 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 OR52R1Q8NGF1 315 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 OR56B4Q8NH76 319 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 ZMAT3Q9HA38 289 aaKnown RBP18.76■□□□□ 0.59
SSBP3-216ENST00000610401 ZC4H2Q9NQZ6 224 aa18.76■□□□□ 0.59
SSBP3-216ENST00000610401 A0A1B0GVI7 797 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 PRR32B1ATL7 298 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 SULT1A3P0DMM9 295 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 SULT1A4P0DMN0 295 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 APEHP13798 732 aaKnown RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 PSMB1P20618 241 aaKnown RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 MMP15P51511 669 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 GUCA2AQ02747 115 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 KLF9Q13886 244 aaPredicted RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 C2orf68Q2NKX9 166 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 GAB4Q2WGN9 574 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 KIAA1324Q6UXG2 1013 aaKnown RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 OR4D10Q8NGI6 311 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 MOAP1Q96BY2 351 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 MCCC2Q9HCC0 563 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 PRDM9Q9NQV7 894 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 TMEM72A0PK05 275 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 RNGTTO60942 597 aaKnown RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 SPDEFO95238 335 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 ACSM4P0C7M7 580 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 PITPNAQ00169 270 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 CDK5R1Q15078 307 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 PON3Q15166 354 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 COL28A1Q2UY09 1125 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 LRRC37A5PQ49AS3 106 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 BPHLQ86WA6 291 aaPredicted RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 OR10AC1Q8NH08 325 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 KXD1Q9BQD3 176 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 ARL6Q9H0F7 186 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 SCP2D1Q9UJQ7 156 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 ZFPL1O95159 310 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 CDK2P24941 298 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 DUSP8Q13202 625 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 EIPR1Q53HC9 387 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 MFSD9Q8NBP5 474 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 RELL2Q8NC24 303 aaPredicted RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 SPPL3Q8TCT6 385 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 ZNF707Q96C28 371 aaPredicted RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 KCTD12Q96CX2 325 aaKnown RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 Q96M85 177 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 CNN2Q99439 309 aaKnown RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 ELF4Q99607 663 aaPredicted RBP18.75■□□□□ 0.59
SSBP3-216ENST00000610401 C1QTNF7Q9BXJ2 289 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 DAPP1Q9UN19 280 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 DTX4Q9Y2E6 619 aa18.75■□□□□ 0.59
SSBP3-216ENST00000610401 HEATR5AQ86XA9 2040 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 OR6C68A6NDL8 312 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 FKTNO75072 461 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 LINC00271P0C7V0 271 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 PTBP1P26599 531 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■■■□ 23.1
SSBP3-216ENST00000610401 TUSC1Q2TAM9 212 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 GARNL3Q5VVW2 1013 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 NDUFAF7Q7L592 441 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 RBPMSQ93062 196 aaKnown RBP18.74■□□□□ 0.59
SSBP3-216ENST00000610401 SMIM19Q96E16 107 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 SLC17A9Q9BYT1 436 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 GSX2Q9BZM3 304 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 LINC00862A6NCI5 91 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 ARL6IP5O75915 188 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 DBIP07108 87 aaKnown RBP18.74■□□□□ 0.59
SSBP3-216ENST00000610401 IGFALSP35858 605 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 MAZP56270 477 aaKnown RBP18.74■□□□□ 0.59
SSBP3-216ENST00000610401 RPS11P62280 158 aaKnown RBP eCLIP18.74■□□□□ 0.59
SSBP3-216ENST00000610401 PDGFRLQ15198 375 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 BEX5Q5H9J7 111 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 PXKQ7Z7A4 578 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 TPRA1Q86W33 373 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 OR51A4Q8NGJ6 313 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 TEX101Q9BY14 249 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 KIAA1549LQ6ZVL6 1849 aa18.74■□□□□ 0.59
SSBP3-216ENST00000610401 G3V3Q6 166 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 RDH16O75452 317 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 TSPAN9O75954 239 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 PPP2CBP62714 309 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 PPP2CAP67775 309 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 ATXN7L3Q14CW9 347 aaPredicted RBP18.73■□□□□ 0.59
SSBP3-216ENST00000610401 KIRREL2Q6UWL6 708 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 FGD2Q7Z6J4 655 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms