RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 ANKS4BQ8N8V4 417 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 SORCS2Q96PQ0 1159 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 TRNT1Q96Q11 434 aaKnown RBP12.99□□□□□ -0.33
CTSA-216ENST00000607212 PAIP2Q9BPZ3 127 aaKnown RBP12.99□□□□□ -0.33
CTSA-216ENST00000607212 CENPHQ9H3R5 247 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 MALRD1Q5VYJ5 2156 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 PRAMEF27A3QJZ7 478 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 AGAP5A6NIR3 686 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 PDLIM1O00151 329 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 RGS16O15492 202 aaPredicted RBP12.98□□□□□ -0.33
CTSA-216ENST00000607212 LGI1O95970 557 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 GKN3PP0CG01 181 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 IGFBP5P24593 272 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 GTF2E2P29084 291 aaKnown RBP12.98□□□□□ -0.33
CTSA-216ENST00000607212 TUBA1BP68363 451 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 TUBA4AP68366 448 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 H3F3AP84243 136 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 EPS8Q12929 822 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 BNIP2Q12982 314 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 KRTAP24-1Q3LI83 254 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 KRT71Q3SY84 523 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 NIPAL3Q6P499 406 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 TUBA1AQ71U36 451 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 ZNF440Q8IYI8 595 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 TMEM45BQ96B21 275 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 ZNF385AQ96PM9 386 aaKnown RBP12.98□□□□□ -0.33
CTSA-216ENST00000607212 ALKBH3Q96Q83 286 aaPredicted RBP12.98□□□□□ -0.33
CTSA-216ENST00000607212 SLC38A2Q96QD8 506 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 OR52E6Q96RD3 313 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 C19orf24Q9BVV8 132 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 SF3B5Q9BWJ5 86 aaKnown RBP12.98□□□□□ -0.33
CTSA-216ENST00000607212 SLC38A1Q9H2H9 487 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 MTHFD2LQ9H903 347 aaPredicted RBP12.98□□□□□ -0.33
CTSA-216ENST00000607212 BTNL2Q9UIR0 455 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
CTSA-216ENST00000607212 A0A096LPE4 126 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 IGHV1-18A0A0C4DH31 117 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 A0A1W2PPZ6 126 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 LIPT2A6NK58 231 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 NDUFS8O00217 210 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 TYROBPO43914 113 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 ANP32DO95626 131 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 KRT75O95678 551 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 TGFAP01135 160 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 C1QCP02747 245 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 ERCC1P07992 297 aaPredicted RBP12.97□□□□□ -0.33
CTSA-216ENST00000607212 BGNP21810 368 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 SERPINF1P36955 418 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 ETV4P43268 484 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 NR4A2P43354 598 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 MAP2K6P52564 334 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 UFM1P61960 85 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 VSNL1P62760 191 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 TXNL4AP83876 142 aaKnown RBP12.97□□□□□ -0.33
CTSA-216ENST00000607212 IL1RL1Q01638 556 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 PLAURQ03405 335 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 TBRG1Q3YBR2 411 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 LIN52Q52LA3 116 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 FAM120AOSQ5T036 256 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 PRAMEF8Q5VWM4 474 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 PRAMEF7Q5VXH5 474 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 KIRREL3Q8IZU9 778 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 OR1K1Q8NGR3 316 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 OR52P1PQ8NH57 321 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 SLC25A36Q96CQ1 311 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 CCDC115Q96NT0 180 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 FOXN4Q96NZ1 517 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 KCNK9Q9NPC2 374 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 OBP2BQ9NPH6 170 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 P2RX2Q9UBL9 471 aa12.97□□□□□ -0.33
CTSA-216ENST00000607212 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.97□□□□□ -0.33
CTSA-216ENST00000607212 LOC390937A0A1W2PQ73 354 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 SLC35F4A4IF30 521 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 TMEM247A6NEH6 219 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 AQP7P3A6NL99 342 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 VSTM5A8MXK1 200 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 B9A039 149 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 BIRC5O15392 142 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 C8BP07358 591 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 CDKN2CP42773 168 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 CRATP43155 626 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 CAPZA2P47755 286 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 SELENOPP49908 381 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 LGALS3BPQ08380 585 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 STX3Q13277 289 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 GSTA3Q16772 222 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 COX20Q5RI15 118 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 C1QTNF12Q5T7M4 302 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 ATG16L1Q676U5 607 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 WBP2NLQ6ICG8 309 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 ZNF836Q6ZNA1 936 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 VRK2Q86Y07 508 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 LRRC34Q8IZ02 419 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 MSI2Q96DH6 328 aaKnown RBP12.96□□□□□ -0.33
CTSA-216ENST00000607212 RAB1BQ9H0U4 201 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 MYOZ1Q9NP98 299 aaPredicted RBP12.96□□□□□ -0.33
CTSA-216ENST00000607212 CA10Q9NS85 328 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 PNPOQ9NVS9 261 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 RLIMQ9NVW2 624 aa12.96□□□□□ -0.33
CTSA-216ENST00000607212 MXRA5Q9NR99 2828 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms