RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SMARCD3Q6STE5 483 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF322Q6U7Q0 402 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 METTL7BQ6UX53 244 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 VITQ6UXI7 678 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 UNQ9370/PRO34162Q6UXP9 181 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 CLEC20AQ6ZU45 233 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 ACOT7LQ6ZUV0 252 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 OVCH1Q7RTY7 1134 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 GPRIN1Q7Z2K8 1008 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 LRRC70Q7Z2Q7 622 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR2W3Q7Z3T1 314 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 TAC4Q86UU9 113 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 ANKRD46Q86W74 232 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 NR2C2APQ86WQ0 139 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 KLHDC8AQ8IYD2 350 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 CFAP206Q8IYR0 622 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF683Q8IZ20 524 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 GPC2Q8N158 579 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 HORMAD2Q8N7B1 307 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 SAMD12Q8N8I0 201 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 PNLDC1Q8NA58 520 aaKnown RBP3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 HJURPQ8NCD3 748 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 B3GALNT2Q8NCR0 500 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 SDR9C7Q8NEX9 313 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 GPRC5AQ8NFJ5 357 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR2AK2Q8NG84 335 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR51Q1Q8NH59 317 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 SVIPQ8NHG7 77 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 LCN9Q8WX39 176 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 THAP4Q8WY91 577 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 NDRG1Q92597 394 aaKnown RBP3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 PMM1Q92871 262 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 EXOSC8Q96B26 276 aaKnown RBP3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 RNFT2Q96EX2 444 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 MYEOVQ96EZ4 313 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 LINGO1Q96FE5 620 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZC3H10Q96K80 434 aaKnown RBP3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 CDCA3Q99618 268 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 CDC6Q99741 560 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF559Q9BR84 538 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 DUSP26Q9BV47 211 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 TMED9Q9BVK6 235 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 RIOK2Q9BVS4 552 aaKnown RBP3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 ULBP1Q9BZM6 244 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 TLNRD1Q9H1K6 362 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 KLHL31Q9H511 634 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 REEP4Q9H6H4 257 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 BRF2Q9HAW0 419 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 BCO1Q9HAY6 547 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 ACKR4Q9NPB9 350 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 MMP26Q9NRE1 261 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC22A11Q9NSA0 550 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 MAN2C1Q9NTJ4 1040 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 UQCC1Q9NVA1 299 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 TMEM248Q9NWD8 314 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 ELOVL2Q9NXB9 296 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 DNAJC27Q9NZQ0 273 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 YARS2Q9Y2Z4 477 aaKnown RBP3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 TMED3Q9Y3Q3 217 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 TRPV2Q9Y5S1 764 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 MYO16Q9Y6X6 1858 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 MYO10Q9HD67 2058 aa3.74□□□□□ -1.81
HMGB1P50-201ENST00000605814 PLXNA3P51805 1871 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 IGLV3-10A0A075B6K4 115 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 A0A1B0GTI1 187 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 A0A1B0GV90 55 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 KANTRA0A1W2PQU2 76 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 TRBC2A0A5B9 178 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 C2orf78A6NCI8 922 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 DRGXA6NNA5 263 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 FAM90A27PA6NNH2 459 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PRR23D1E9PI22 279 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 RPL36A-HNRNPH2H7BZ11 118 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 MFNGO00587 321 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ADAM10O14672 748 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 TCAPO15273 167 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC16A5O15375 505 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 YY2O15391 372 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ARPC5O15511 151 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 OGG1O15527 345 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 IRAK2O43187 625 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 BCL2L11O43521 198 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR2T1O43869 369 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 TBX19O60806 448 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ICOSLGO75144 302 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 KHDRBS3O75525 346 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 GATBO75879 557 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 BEST1O76090 585 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 UBXN7O94888 489 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PCDH8O95206 1070 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 SIX6O95475 246 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 F10P00742 488 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PDYNP01213 254 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 IGF2P01344 180 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CD5P06127 495 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 H1F0P07305 194 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CD3GP09693 182 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 RAB40ALP0C0E4 278 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR8U8P0C7N1 319 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 FAM157CP0CG43 387 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms