RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 KLHL24Q6TFL4 600 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 AAED1Q7RTV5 226 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 GPAT4Q86UL3 456 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 VRK2Q86Y07 508 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 ZNF440Q8IYI8 595 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 CADM2Q8N3J6 435 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 OR52P1PQ8NH57 321 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 C10orf105Q8TEF2 133 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 ZBTB18Q99592 522 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 SF3B5Q9BWJ5 86 aaKnown RBP11.51□□□□□ -0.57
RPS28-204ENST00000602140 WDR55Q9H6Y2 383 aaPredicted RBP11.51□□□□□ -0.57
RPS28-204ENST00000602140 MOKQ9UQ07 419 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 PMF1-BGLAPU3KQ54 211 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 STAB1Q9NY15 2570 aa11.51□□□□□ -0.57
RPS28-204ENST00000602140 CDHR4A6H8M9 788 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 AQP7P3A6NL99 342 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 KLF11O14901 512 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 KRT33AO76009 404 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 LY6HO94772 140 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 KRT75O95678 551 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 WNT11O96014 354 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 FAM157CP0CG43 387 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 ETFAP13804 333 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 ACAA2P42765 397 aaKnown RBP11.5□□□□□ -0.57
RPS28-204ENST00000602140 EFNA4P52798 201 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 TNFAIP8L3Q5GJ75 292 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 CEP85LQ5SZL2 805 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 TMEM225Q6GV28 225 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 ZNF836Q6ZNA1 936 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 PHC2Q8IXK0 858 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 ANKRD42Q8N9B4 389 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 POMGNT2Q8NAT1 580 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 NANOS1Q8WY41 292 aaKnown RBP11.5□□□□□ -0.57
RPS28-204ENST00000602140 FBXO17Q96EF6 278 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 AURKBQ96GD4 344 aaPredicted RBP11.5□□□□□ -0.57
RPS28-204ENST00000602140 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 SLC6A13Q9NSD5 602 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 ADPRHL2Q9NX46 363 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 P2RX2Q9UBL9 471 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 CDC42EP3Q9UKI2 254 aa11.5□□□□□ -0.57
RPS28-204ENST00000602140 HDAC3O15379 428 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 BCHEP06276 602 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 CSF3P09919 207 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 KITP10721 976 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 CRATP43155 626 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 MVDP53602 400 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 COPZ1P61923 177 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 MST1LQ2TV78 715 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 LIN52Q52LA3 116 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 C1QTNF12Q5T7M4 302 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 HHATQ5VTY9 493 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 WBP2NLQ6ICG8 309 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 ABHD12BQ7Z5M8 362 aaPredicted RBP11.49□□□□□ -0.57
RPS28-204ENST00000602140 CLIP4Q8N3C7 705 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 GLB1L3Q8NCI6 653 aaPredicted RBP11.49□□□□□ -0.57
RPS28-204ENST00000602140 TMEM158Q8WZ71 300 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 PROX1Q92786 737 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 TAPBPLQ9BX59 468 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 PARD6BQ9BYG5 372 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 TMEM45AQ9NWC5 275 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 CALML5Q9NZT1 146 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 ZNF443Q9Y2A4 671 aaPredicted RBP11.49□□□□□ -0.57
RPS28-204ENST00000602140 DSPPQ9NZW4 1301 aa11.49□□□□□ -0.57
RPS28-204ENST00000602140 IGHV1-18A0A0C4DH31 117 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 TRPC5OSA6NMA1 111 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 A8MVM7 634 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 FRS3O43559 492 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 ANP32DO95626 131 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 LGI1O95970 557 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 F12P00748 615 aaPredicted RBP11.48□□□□□ -0.57
RPS28-204ENST00000602140 IL6P05231 212 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 TFPTP0C1Z6 253 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 IGHV4-31P0DP07 118 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 PRG2P13727 222 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 NCF2P19878 526 aaPredicted RBP11.48□□□□□ -0.57
RPS28-204ENST00000602140 USF1P22415 310 aaPredicted RBP11.48□□□□□ -0.57
RPS28-204ENST00000602140 SELENOPP49908 381 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 P2RY4P51582 365 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 CRISP3P54108 245 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 DSTNP60981 165 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 LGALS3BPQ08380 585 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 LARS2Q15031 903 aaKnown RBP11.48□□□□□ -0.57
RPS28-204ENST00000602140 SWI5Q1ZZU3 235 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 TBRG1Q3YBR2 411 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 RPS26P11Q5JNZ5 115 aaPredicted RBP11.48□□□□□ -0.57
RPS28-204ENST00000602140 C1orf140Q5VVS0 124 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 CYB5R2Q6BCY4 276 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 NXNQ6DKJ4 435 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 CREB3L2Q70SY1 520 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 OR1K1Q8NGR3 316 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 SLC38A5Q8WUX1 472 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 BOD1Q96IK1 185 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 BEX2Q9BXY8 128 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 PIF1Q9H611 641 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 TPT1P8Q9HAU6 139 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 OBP2BQ9NPH6 170 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 PRDM4Q9UKN5 801 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 ZNF232Q9UNY5 417 aa11.48□□□□□ -0.57
RPS28-204ENST00000602140 HEATR1Q9H583 2144 aaKnown RBP11.47□□□□□ -0.57
RPS28-204ENST00000602140 ZNF587BE7ETH6 402 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms