RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 CMTM6Q9NX76 183 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 B3GAT1Q9P2W7 334 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 ABCD2Q9UBJ2 740 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 MALT1Q9UDY8 824 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 NDRG3Q9UGV2 375 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 USP22Q9UPT9 525 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 ANGPT4Q9Y264 503 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 GPR52Q9Y2T5 361 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 FLVCR1Q9Y5Y0 555 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 MED13LQ71F56 2210 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 DSCAMO60469 2012 aa7.78□□□□□ -1.16
SSBP4-208ENST00000600628 NIPBLQ6KC79 2804 aaeCLIP7.77□□□□□ -1.177e-6■■□□□ 12.9
SSBP4-208ENST00000600628 GMNCA6NCL1 334 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 FAM220BPB1ANY3 271 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 NME4O00746 187 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 GPR171O14626 319 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 CASKO14936 926 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 CCDC22O60826 627 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 SHOX2O60902 331 aaPredicted RBP7.77□□□□□ -1.17
SSBP4-208ENST00000600628 ZNF432O94892 652 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 PLGP00747 810 aaPredicted RBP7.77□□□□□ -1.17
SSBP4-208ENST00000600628 GPIP06744 558 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 PNMTP11086 282 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 PPP3CBP16298 524 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 AQP1P29972 269 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 PRDX6P30041 224 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 GYS2P54840 703 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 COPZ1P61923 177 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 CEACAM7Q14002 265 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 CYP51A1Q16850 503 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 TMEM201Q5SNT2 666 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 INTS11Q5TA45 600 aaKnown RBP7.77□□□□□ -1.17
SSBP4-208ENST00000600628 C1orf140Q5VVS0 124 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 ERICH5Q6P6B1 374 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 ZNF613Q6PF04 617 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 GALNT5Q7Z7M9 940 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 POU5F2Q8N7G0 328 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 ZNF433Q8N7K0 673 aaPredicted RBP7.77□□□□□ -1.17
SSBP4-208ENST00000600628 TMEM99Q8N816 258 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 ADPRHL1Q8NDY3 354 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 OR6T1Q8NGN1 323 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 TAAR8Q969N4 342 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 RCN3Q96D15 328 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 ELAC2Q9BQ52 826 aaKnown RBP7.77□□□□□ -1.17
SSBP4-208ENST00000600628 TMEM43Q9BTV4 400 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 HDHD5Q9BXW7 423 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 CXXC4Q9H2H0 198 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 FANCFQ9NPI8 374 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 GID8Q9NWU2 228 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 AP3M1Q9Y2T2 418 aa7.77□□□□□ -1.17
SSBP4-208ENST00000600628 VAMP5O95183 116 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 IGF2P01344 180 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 BGLAPP02818 100 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 TSPAN19P0C672 248 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 TFPIP10646 304 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 IDUAP35475 653 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 IST1P53990 364 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 CDH12P55289 794 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 LTBQ06643 244 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 SF3A3Q12874 501 aaKnown RBP eCLIP7.76□□□□□ -1.172e-6■■□□□ 13.6
SSBP4-208ENST00000600628 ITGADQ13349 1161 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 OR1Q1Q15612 314 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 ALG10BQ5I7T1 473 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 C1QTNF12Q5T7M4 302 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 FAM69AQ5T7M9 428 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 SPNS3Q6ZMD2 512 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 WDR88Q6ZMY6 472 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 STK32CQ86UX6 486 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 CXorf67Q86X51 503 aaPredicted RBP7.76□□□□□ -1.17
SSBP4-208ENST00000600628 RBM45Q8IUH3 476 aaKnown RBP7.76□□□□□ -1.17
SSBP4-208ENST00000600628 EPHX4Q8IUS5 362 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 CADM2Q8N3J6 435 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 SMYD1Q8NB12 490 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 OR9K2Q8NGE7 335 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 RASSF5Q8WWW0 418 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 NINJ1Q92982 152 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 MBD6Q96DN6 1003 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 KTI12Q96EK9 354 aaPredicted RBP7.76□□□□□ -1.17
SSBP4-208ENST00000600628 SLC47A1Q96FL8 570 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 HOPXQ9BPY8 73 aaPredicted RBP7.76□□□□□ -1.17
SSBP4-208ENST00000600628 USB1Q9BQ65 265 aaKnown RBP7.76□□□□□ -1.17
SSBP4-208ENST00000600628 ECSITQ9BQ95 431 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 PRSS27Q9BQR3 290 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 LIME1Q9H400 295 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 C12orf49Q9H741 205 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 EFCAB1Q9HAE3 211 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 KLHL28Q9NXS3 571 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 EMC3Q9P0I2 261 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 GMPR2Q9P2T1 348 aaKnown RBP7.76□□□□□ -1.17
SSBP4-208ENST00000600628 PRSS50Q9UI38 385 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 ST6GALNAC2Q9UJ37 374 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 EDARQ9UNE0 448 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 NF1P21359 2839 aa7.76□□□□□ -1.17
SSBP4-208ENST00000600628 HEATR1Q9H583 2144 aaKnown RBP7.75□□□□□ -1.17
SSBP4-208ENST00000600628 TRAV36DV7A0A075B6V5 113 aa7.75□□□□□ -1.17
SSBP4-208ENST00000600628 CCT8L1PA6NM43 557 aa7.75□□□□□ -1.17
SSBP4-208ENST00000600628 MS4A18H0YCH9 400 aa7.75□□□□□ -1.17
SSBP4-208ENST00000600628 M0R3H8 397 aa7.75□□□□□ -1.17
SSBP4-208ENST00000600628 CHP2O43745 196 aa7.75□□□□□ -1.17
SSBP4-208ENST00000600628 OR2T1O43869 369 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms