RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TACR3P29371 465 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 IL12AP29459 219 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 CHI3L1P36222 383 aaPredicted RBP12.85□□□□□ -0.35
IRF3-223ENST00000599223 NME5P56597 212 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 HPCAP84074 193 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 MAPK11Q15759 364 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 ELOA3BQ3SY89 546 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 CHRFAM7AQ494W8 412 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 COX20Q5RI15 118 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 KLHL17Q6TDP4 642 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 CLEC2AQ6UVW9 174 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 C6orf89Q6UWU4 347 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 FBXL14Q8N1E6 418 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 ELOA3Q8NG57 546 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 PNPT1Q8TCS8 783 aaKnown RBP12.85□□□□□ -0.35
IRF3-223ENST00000599223 STON2Q8WXE9 905 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 CCDC115Q96NT0 180 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 PCDHGB4Q9UN71 923 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 MGAT4BQ9UQ53 548 aa12.85□□□□□ -0.35
IRF3-223ENST00000599223 MAGEA8P43361 318 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 FABP6P51161 128 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 POLR2HP52434 150 aaKnown RBP12.84□□□□□ -0.35
IRF3-223ENST00000599223 VLDLRP98155 873 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 LGALS3BPQ08380 585 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
IRF3-223ENST00000599223 SLC17A1Q14916 467 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
IRF3-223ENST00000599223 ANXA8L1Q5VT79 327 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 PODNL1Q6PEZ8 512 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 ZIC4Q8N9L1 334 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 C1orf162Q8NEQ5 155 aaPredicted RBP12.84□□□□□ -0.35
IRF3-223ENST00000599223 C10orf105Q8TEF2 133 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 ZNF385AQ96PM9 386 aaKnown RBP12.84□□□□□ -0.35
IRF3-223ENST00000599223 TNFRSF13CQ96RJ3 184 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 SLC17A5Q9NRA2 495 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.84□□□□□ -0.35
IRF3-223ENST00000599223 TRAPPC4Q9Y296 219 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 SLC9A8Q9Y2E8 581 aa12.84□□□□□ -0.35
IRF3-223ENST00000599223 PHF1O43189 567 aaPredicted RBP12.83□□□□□ -0.36
IRF3-223ENST00000599223 ZNF208O43345 1280 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 HNRNPCL1O60812 293 aaKnown RBP12.83□□□□□ -0.36
IRF3-223ENST00000599223 FAM157CP0CG43 387 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 LBPP18428 481 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 CLK1P49759 484 aaKnown RBP12.83□□□□□ -0.36
IRF3-223ENST00000599223 IDH3AP50213 366 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 RASSF2P50749 326 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 UFM1P61960 85 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 SLC35A1P78382 337 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 EPS8Q12929 822 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 HIKESHIQ53FT3 197 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 METTL21CQ5VZV1 264 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 OR7E24Q6IFN5 339 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 ZNF544Q6NX49 715 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 EPGNQ6UW88 154 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 WDR60Q8WVS4 1066 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 TRNT1Q96Q11 434 aaKnown RBP12.83□□□□□ -0.36
IRF3-223ENST00000599223 CCDC28BQ9BUN5 200 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 TCF7L2Q9NQB0 619 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 SLC6A13Q9NSD5 602 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 RLIMQ9NVW2 624 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 BTNL2Q9UIR0 455 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 ATP23Q9Y6H3 246 aa12.83□□□□□ -0.36
IRF3-223ENST00000599223 CCDC154A6NI56 674 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 SDHDO14521 159 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 AKR7A3O95154 331 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 GSNP06396 782 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 IGHV4-31P0DP07 118 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 S100A3P33764 101 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 HTR3AP46098 478 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 P2RY4P51582 365 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 CLNS1AP54105 237 aaKnown RBP12.82□□□□□ -0.36
IRF3-223ENST00000599223 RAB35Q15286 201 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 DPY19L1Q2PZI1 675 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 MST1LQ2TV78 715 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 OTUD3Q5T2D3 398 aaPredicted RBP12.82□□□□□ -0.36
IRF3-223ENST00000599223 NXNQ6DKJ4 435 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 OGFOD2Q6N063 350 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 PAQR6Q6TCH4 344 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 CMIPQ8IY22 773 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 C17orf78Q8N4C9 275 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 FITM2Q8N6M3 262 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 ARIH2OSQ8N7S6 290 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 TMEM99Q8N816 258 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 OR9K2Q8NGE7 335 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 FAM168AQ92567 244 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 TMEM45BQ96B21 275 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 DDIT4LQ96D03 193 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 MYLK2Q9H1R3 596 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 MEAF6Q9HAF1 191 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 SAR1AQ9NR31 198 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 AIG1Q9NVV5 245 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 UPB1Q9UBR1 384 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 AMDHD2Q9Y303 409 aa12.82□□□□□ -0.36
IRF3-223ENST00000599223 CFAP73A6NFT4 308 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 LIPT2A6NK58 231 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 FAAHO00519 579 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 UBOX5O94941 541 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 IFNA2P01563 188 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 GKN3PP0CG01 181 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 SLC25A16P16260 332 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms