RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 SH3BGRP55822 239 aaPredicted RBP15.3■□□□□ 0.04
HOMER3-210ENST00000599097 UBE2NP61088 152 aaKnown RBP15.3■□□□□ 0.04
HOMER3-210ENST00000599097 SPOCK1Q08629 439 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 SYPL1Q16563 259 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 GPAT4Q86UL3 456 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 ANKFN1Q8N957 763 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 OR9K2Q8NGE7 335 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 ZG16BQ96DA0 208 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 SORT1Q99523 831 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 PIMREGQ9BSJ6 248 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 SHARPINQ9H0F6 387 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 CENPHQ9H3R5 247 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 KCNK9Q9NPC2 374 aa15.3■□□□□ 0.04
HOMER3-210ENST00000599097 A0A1W2PR80 420 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 CDHR4A6H8M9 788 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 LIPT2A6NK58 231 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 CLDN24A6NM45 220 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 AP3D1O14617 1153 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 HDAC3O15379 428 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 BCAS1O75363 584 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-210ENST00000599097 ANP32DO95626 131 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 F12P00748 615 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-210ENST00000599097 CRYAAP02489 173 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 CHRM4P08173 479 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 IMPDH2P12268 514 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 NCF2P19878 526 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-210ENST00000599097 USF1P22415 310 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-210ENST00000599097 GTF2E2P29084 291 aaKnown RBP15.29■□□□□ 0.04
HOMER3-210ENST00000599097 PDLIM4P50479 330 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 OR7A5Q15622 319 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 C3orf36Q3SXR2 165 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 TSPO2Q5TGU0 170 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 RNF220Q5VTB9 566 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 C9orf135Q5VTT2 229 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 HHATQ5VTY9 493 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 MSANTD1Q6ZTZ1 278 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 ZNF525Q8N782 197 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 ZNF540Q8NDQ6 660 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 C10orf105Q8TEF2 133 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 DNAJA3Q96EY1 480 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 KATNB1Q9BVA0 655 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 ADAM19Q9H013 955 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 RAD21L1Q9H4I0 556 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 ARGLU1Q9NWB6 273 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-210ENST00000599097 RASD1Q9Y272 281 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 IFT52Q9Y366 437 aa15.29■□□□□ 0.04
HOMER3-210ENST00000599097 PDE5AO76074 875 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 HOXB1P14653 301 aaPredicted RBP15.28■□□□□ 0.04
HOMER3-210ENST00000599097 PTNP21246 168 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 BGNP21810 368 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 THBS2P35442 1172 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 CEACAM7Q14002 265 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 ATG16L1Q676U5 607 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 C5orf46Q6UWT4 87 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 CADM2Q8N3J6 435 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 WDR31Q8NA23 367 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 ANKK1Q8NFD2 765 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 OR52P1PQ8NH57 321 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 SLC35B4Q969S0 331 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 PAIP2Q9BPZ3 127 aaKnown RBP15.28■□□□□ 0.04
HOMER3-210ENST00000599097 C1QTNF6Q9BXI9 259 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 THAP1Q9NVV9 213 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 DNHD1Q96M86 4753 aa15.28■□□□□ 0.04
HOMER3-210ENST00000599097 FBN1P35555 2871 aaKnown RBP15.27■□□□□ 0.04
HOMER3-210ENST00000599097 A0A096LNT2 108 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 ATP6V1G2-DDX39BF2Z307 99 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 AKAP8O43823 692 aaKnown RBP15.27■□□□□ 0.04
HOMER3-210ENST00000599097 AKR7A3O95154 331 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 AHSA1O95433 338 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 ZCCHC18P0CG32 403 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 CRATP43155 626 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 NME5P56597 212 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 UFM1P61960 85 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 LSM11P83369 360 aaKnown RBP eCLIP15.27■□□□□ 0.04
HOMER3-210ENST00000599097 PRAMEF8Q5VWM4 474 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 PRAMEF7Q5VXH5 474 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 B3GLCTQ6Y288 498 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 SLC46A3Q7Z3Q1 461 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 HMGN2P46Q86SG4 172 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 MAGEE2Q8TD90 523 aaPredicted RBP15.27■□□□□ 0.04
HOMER3-210ENST00000599097 STK35Q8TDR2 534 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 SLC38A2Q96QD8 506 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 MANSC1Q9H8J5 431 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 ADPRHL2Q9NX46 363 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 KCNS2Q9ULS6 477 aa15.27■□□□□ 0.04
HOMER3-210ENST00000599097 DSPPQ9NZW4 1301 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 A0A0G2JPF8 293 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 PRAMEF27A3QJZ7 478 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 HNRNPCL2B2RXH8 293 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 HNRNPCL3B7ZW38 293 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 B9A039 149 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 HNRNPCL1O60812 293 aaKnown RBP15.26■□□□□ 0.03
HOMER3-210ENST00000599097 SLC22A3O75751 556 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 ALDOCP09972 364 aaKnown RBP15.26■□□□□ 0.03
HOMER3-210ENST00000599097 HNRNPCL4P0DMR1 293 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 CDH2P19022 906 aaPredicted RBP15.26■□□□□ 0.03
HOMER3-210ENST00000599097 NTF4P34130 210 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 DSTNP60981 165 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 PLAURQ03405 335 aa15.26■□□□□ 0.03
HOMER3-210ENST00000599097 BST1Q10588 318 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms