RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 EMC3Q9P0I2 261 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 NOSIPQ9Y314 301 aaKnown RBP13.36□□□□□ -0.27
TGFB1-202ENST00000597453 HDGFL3Q9Y3E1 203 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 CAPN7Q9Y6W3 813 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 A0A0G2JPF8 293 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 GMNCA6NCL1 334 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 OR5H1A6NKK0 313 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 HNRNPCL2B2RXH8 293 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 HNRNPCL3B7ZW38 293 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 RNF223E7ERA6 249 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 ABCD4O14678 606 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 HNRNPCL1O60812 293 aaKnown RBP13.35□□□□□ -0.27
TGFB1-202ENST00000597453 CCDC22O60826 627 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 NDUFS7O75251 213 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 CD8AP01732 235 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 IGHV4-39P01824 125 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 THBS1P07996 1170 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 HNRNPCL4P0DMR1 293 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 ARAFP10398 606 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 IL7RP16871 459 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 PTNP21246 168 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 DRD4P21917 467 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 ACVR1BP36896 505 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 SLC16A1P53985 500 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 GYS2P54840 703 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 GNGT1P63211 74 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 TRMT5Q32P41 509 aaKnown RBP13.35□□□□□ -0.27
TGFB1-202ENST00000597453 LIN52Q52LA3 116 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 RPS26P11Q5JNZ5 115 aaPredicted RBP13.35□□□□□ -0.27
TGFB1-202ENST00000597453 FBXW9Q5XUX1 488 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 OR52P1PQ8NH57 321 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 MAL2Q969L2 176 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 APH1AQ96BI3 265 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 MUCL1Q96DR8 90 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 ZHX1-C8orf76Q96EF9 292 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 TRMT61AQ96FX7 289 aaKnown RBP13.35□□□□□ -0.27
TGFB1-202ENST00000597453 TRAF4Q9BUZ4 470 aaPredicted RBP13.35□□□□□ -0.27
TGFB1-202ENST00000597453 SLCO5A1Q9H2Y9 848 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 HEATR1Q9H583 2144 aaKnown RBP13.35□□□□□ -0.27
TGFB1-202ENST00000597453 TMEM38AQ9H6F2 299 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 CISD1Q9NZ45 108 aaKnown RBP13.35□□□□□ -0.27
TGFB1-202ENST00000597453 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
TGFB1-202ENST00000597453 ATRQ13535 2644 aa13.35□□□□□ -0.27
TGFB1-202ENST00000597453 CUBNO60494 3623 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 TMED7-TICAM2A0A0A6YYA0 188 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 TMEM72A0PK05 275 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 DNPH1O43598 174 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 NPPAP01160 153 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 IMPDH2P12268 514 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 IDUAP35475 653 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 CLK1P49759 484 aaKnown RBP13.34□□□□□ -0.27
TGFB1-202ENST00000597453 CDH11P55287 796 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
TGFB1-202ENST00000597453 OR2B6P58173 313 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 PPP2R2BQ00005 443 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 SPOCK1Q08629 439 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 ZSCAN26Q16670 478 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 MRPL2Q5T653 305 aaKnown RBP13.34□□□□□ -0.27
TGFB1-202ENST00000597453 RNF220Q5VTB9 566 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 REP15Q6BDI9 236 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 P2RY8Q86VZ1 359 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 SNX32Q86XE0 403 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 UBE2J2Q8N2K1 259 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 BBS10Q8TAM1 723 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 PIGXQ8TBF5 258 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 CACYBPQ9HB71 228 aaKnown RBP13.34□□□□□ -0.27
TGFB1-202ENST00000597453 ARMCX1Q9P291 453 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 TMEM181Q9P2C4 612 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 OSGIN1Q9UJX0 560 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 GDF2Q9UK05 429 aaPredicted RBP13.34□□□□□ -0.27
TGFB1-202ENST00000597453 ZNF443Q9Y2A4 671 aaPredicted RBP13.34□□□□□ -0.27
TGFB1-202ENST00000597453 TMED7Q9Y3B3 224 aa13.34□□□□□ -0.27
TGFB1-202ENST00000597453 A0A1W2PR80 420 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 ZC3H12DA2A288 527 aaKnown RBP13.33□□□□□ -0.28
TGFB1-202ENST00000597453 CDHR4A6H8M9 788 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 C5orf58C9J3I9 102 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 GPR171O14626 319 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 MRASO14807 208 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 SNX3O60493 162 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 TACR3P29371 465 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 HTR3AP46098 478 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 ZNF83P51522 516 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 POLR2HP52434 150 aaKnown RBP13.33□□□□□ -0.28
TGFB1-202ENST00000597453 MTPNP58546 118 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 H3F3AP84243 136 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 CDK6Q00534 326 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 LARS2Q15031 903 aaKnown RBP13.33□□□□□ -0.28
TGFB1-202ENST00000597453 ETFDHQ16134 617 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 ZSWIM7Q19AV6 140 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 MMEL1Q495T6 779 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 DNM1P46Q6ZS02 220 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 CPLX4Q7Z7G2 160 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 DTX2Q86UW9 622 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 VRK2Q86Y07 508 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 OR52E4Q8NGH9 312 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 OR52N5Q8NH56 324 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 NFKBIDQ8NI38 313 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 FAM107BQ9H098 131 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 ASB6Q9NWX5 421 aa13.33□□□□□ -0.28
TGFB1-202ENST00000597453 MALT1Q9UDY8 824 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms