RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 UQCRC1P31930 480 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 IFNA8P32881 189 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 FXNQ16595 210 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 OTUD3Q5T2D3 398 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 ABLIM2Q6H8Q1 611 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 PAQR6Q6TCH4 344 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 TSPYL5Q86VY4 417 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 MFSD8Q8NHS3 518 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 RNASE6Q93091 150 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 KTI12Q96EK9 354 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 MPP4Q96JB8 637 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 PSD2Q9BQI7 771 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 TMEM43Q9BTV4 400 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 RBM24Q9BX46 236 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 OPN3Q9H1Y3 402 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 C12orf49Q9H741 205 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 GORASP2Q9H8Y8 452 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 DCAF13Q9NV06 445 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 JKAMPQ9P055 326 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 EMC3Q9P0I2 261 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 C6orf203Q9P0P8 240 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 FOXD3Q9UJU5 478 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 PKDREJQ9NTG1 2253 aa17.52■□□□□ 0.4
SHKBP1-214ENST00000597396 IGKV1D-42A0A075B6H8 117 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 AKR7A3O95154 331 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 OR5F1O95221 314 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 YES1P07947 543 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 FBXL19-AS1Q494R0 122 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 FAM69AQ5T7M9 428 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 TTC33Q6PID6 262 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 GDF7Q7Z4P5 450 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 CCDC103Q8IW40 242 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 TMEM99Q8N816 258 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF300Q96RE9 604 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 PTDSS2Q9BVG9 487 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 BCO1Q9HAY6 547 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 NPDC1Q9NQX5 325 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 RIMS3Q9UJD0 308 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 V9GYQ6 96 aa17.51■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF814B7Z6K7 855 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 GYG2O15488 501 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 PDE5AO76074 875 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 LYPD3O95274 346 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 THY1P04216 161 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 CD8BP10966 210 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 H3F3AP84243 136 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 FOXD4Q12950 439 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 PIN1Q13526 163 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 PDK3Q15120 406 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 DNAL1Q4LDG9 190 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 MEX3BQ6ZN04 569 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 STK32CQ86UX6 486 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 C10orf53Q8N6V4 93 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 TAAR8Q969N4 342 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF775Q96BV0 537 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 PRRC1Q96M27 445 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 THTPAQ9BU02 230 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 AMBRA1Q9C0C7 1298 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 CENPEQ02224 2701 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 CACNA1DQ01668 2161 aa17.5■□□□□ 0.39
SHKBP1-214ENST00000597396 AQP7P3A6NL99 342 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF716A6NP11 495 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF724A8MTY0 619 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 A8MXE2 369 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 FTCDNL1E5RQL4 147 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 GPR171O14626 319 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 RAMP1O60894 148 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 CGAP01215 116 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 THRBP10828 461 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 COX6B1P14854 86 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 CBLP22681 906 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 YAP1P46937 504 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 ST3GAL3Q11203 375 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 MFSD13AQ14CX5 517 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 TMEM225Q6GV28 225 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 LINC00114Q6XXX2 140 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 WDR88Q6ZMY6 472 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 NUFIP2Q7Z417 695 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 GALNT5Q7Z7M9 940 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF610Q8N9Z0 462 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 MUC13Q9H3R2 512 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 PLSCR4Q9NRQ2 329 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 GALNT8Q9NY28 637 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 ING1Q9UK53 422 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 CREBBPQ92793 2442 aa17.49■□□□□ 0.39
SHKBP1-214ENST00000597396 IGKV3D-15A0A087WSY6 115 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 KPNA4O00629 521 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 STAMBPO95630 424 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 GRPRP30550 384 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 SLC16A1P53985 500 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 GPAT4Q86UL3 456 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 CYP4Z1Q86W10 505 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 KIF18BQ86Y91 864 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 OR6S1Q8NH40 331 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 PYURFQ96I23 114 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 PRSS27Q9BQR3 290 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 FNDC11Q9BVV2 318 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 ENKD1Q9H0I2 346 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 ACTR3BQ9P1U1 418 aa17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 A4GNTQ9UNA3 340 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms