RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 A0A1W2PR80 420 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 AQP7P3A6NL99 342 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 SHISA9B4DS77 424 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 PDLIM1O00151 329 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 ITGA5P08648 1049 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 ETS2P15036 469 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 PPIBP23284 216 aaKnown RBP20.65■□□□□ 0.9
LSM4-204ENST00000594828 PGGHGQ32M88 737 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 AGKQ53H12 422 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 TSPO2Q5TGU0 170 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 C1orf140Q5VVS0 124 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 KLHL17Q6TDP4 642 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 TMEM108Q6UXF1 575 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 GPAT4Q86UL3 456 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 OR9K2Q8NGE7 335 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 GTPBP3Q969Y2 492 aaKnown RBP20.65■□□□□ 0.9
LSM4-204ENST00000594828 TMEM45BQ96B21 275 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 RADILQ96JH8 1075 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 PIF1Q9H611 641 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 VAPAQ9P0L0 249 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 DCTN4Q9UJW0 460 aa20.65■□□□□ 0.9
LSM4-204ENST00000594828 MAGED1Q9Y5V3 778 aaPredicted RBP20.65■□□□□ 0.9
LSM4-204ENST00000594828 HMGB1P1B2RPK0 211 aaPredicted RBP20.64■□□□□ 0.89
LSM4-204ENST00000594828 FRS3O43559 492 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 PTAFRP25105 342 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 ATP4BP51164 291 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 ZNF83P51522 516 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 IRX1P78414 480 aaPredicted RBP20.64■□□□□ 0.89
LSM4-204ENST00000594828 HOXC5Q00444 222 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 GCNT6Q5T4J0 391 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 C9orf135Q5VTT2 229 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 AAED1Q7RTV5 226 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 HDXQ7Z353 690 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 PIAS4Q8N2W9 510 aaPredicted RBP20.64■□□□□ 0.89
LSM4-204ENST00000594828 ZIC4Q8N9L1 334 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 NFKBIDQ8NI38 313 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 STK35Q8TDR2 534 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 MGAT4BQ9UQ53 548 aa20.64■□□□□ 0.89
LSM4-204ENST00000594828 NPIPB7O75200 414 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 ARAFP10398 606 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 CDKN1AP38936 164 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 CDH11P55287 796 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 TGFBR3Q03167 851 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 SQLEQ14534 574 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 REEP3Q6NUK4 255 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 ZNF385AQ96PM9 386 aaKnown RBP20.63■□□□□ 0.89
LSM4-204ENST00000594828 ALG2Q9H553 416 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 FAIMQ9NVQ4 179 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 GMEB1Q9Y692 573 aa20.63■□□□□ 0.89
LSM4-204ENST00000594828 TMEM229AB2RXF0 380 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 VAMP5O95183 116 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 AHSA1O95433 338 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 PRKAR1BP31321 381 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 CDK6Q00534 326 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 KRT73Q86Y46 540 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 C10orf111Q8N326 155 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 POMGNT2Q8NAT1 580 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 C1orf162Q8NEQ5 155 aaPredicted RBP20.62■□□□□ 0.89
LSM4-204ENST00000594828 SPATA5L1Q9BVQ7 753 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 C1QTNF6Q9BXI9 259 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 AMBRA1Q9C0C7 1298 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 RABEP2Q9H5N1 569 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 RPS6KB2Q9UBS0 482 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 CORO2BQ9UQ03 480 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 USF3Q68DE3 2245 aa20.62■□□□□ 0.89
LSM4-204ENST00000594828 TRBV5-3A0A0A0MS03 114 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 ELOA3DA6NLF2 546 aaPredicted RBP20.61■□□□□ 0.89
LSM4-204ENST00000594828 EVPLLA8MZ36 301 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 M0R1B8 84 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 GPX2P18283 190 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 CD40P25942 277 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 MPGP29372 298 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 P2RY4P51582 365 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 ELOA3BQ3SY89 546 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 SLC22A25Q6T423 547 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 C17orf78Q8N4C9 275 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 WDR31Q8NA23 367 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 ELOA3Q8NG57 546 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 MFSD8Q8NHS3 518 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 CKAP2Q8WWK9 683 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 SLC25A36Q96CQ1 311 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 MAGEB18Q96M61 343 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 TRAF4Q9BUZ4 470 aaPredicted RBP20.61■□□□□ 0.89
LSM4-204ENST00000594828 RSPO3Q9BXY4 272 aaPredicted RBP20.61■□□□□ 0.89
LSM4-204ENST00000594828 SLCO5A1Q9H2Y9 848 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 VIPAS39Q9H9C1 493 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 SLC17A5Q9NRA2 495 aa20.61■□□□□ 0.89
LSM4-204ENST00000594828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.61■□□□□ 0.89
LSM4-204ENST00000594828 CD8AP01732 235 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 EGR4Q05215 589 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 ETFDHQ16134 617 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 CLEC12BQ2HXU8 276 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 CREB3L2Q70SY1 520 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 DEPDC4Q8N2C3 294 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 THOC1Q96FV9 657 aaKnown RBP20.6■□□□□ 0.89
LSM4-204ENST00000594828 GRIP2Q9C0E4 1043 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 IKZF5Q9H5V7 419 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 TMEM38AQ9H6F2 299 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 ARGLU1Q9NWB6 273 aaPredicted RBP20.6■□□□□ 0.89
LSM4-204ENST00000594828 POU2F3Q9UKI9 436 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms