RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 EGFL7Q9UHF1 273 aa22.95■■□□□ 1.26
TRIM28-204ENST00000594806 TRAV36DV7A0A075B6V5 113 aa22.94■■□□□ 1.26
TRIM28-204ENST00000594806 OR5F1O95221 314 aa22.94■■□□□ 1.26
TRIM28-204ENST00000594806 ZNF682O95780 498 aa22.94■■□□□ 1.26
TRIM28-204ENST00000594806 THRBP10828 461 aa22.94■■□□□ 1.26
TRIM28-204ENST00000594806 UQCRC1P31930 480 aa22.94■■□□□ 1.26
TRIM28-204ENST00000594806 IFI44LQ53G44 452 aa22.94■■□□□ 1.26
TRIM28-204ENST00000594806 RNF148Q8N7C7 305 aa22.94■■□□□ 1.26
TRIM28-204ENST00000594806 SF3B5Q9BWJ5 86 aaKnown RBP22.94■■□□□ 1.26
TRIM28-204ENST00000594806 ING1Q9UK53 422 aaPredicted RBP22.94■■□□□ 1.26
TRIM28-204ENST00000594806 SAMD4AQ9UPU9 718 aaKnown RBP22.94■■□□□ 1.26
TRIM28-204ENST00000594806 IGKV1D-42A0A075B6H8 117 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 AQP7P3A6NL99 342 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 FTCDNL1E5RQL4 147 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 VAMP5O95183 116 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 OR1E2P47887 323 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 TAS2R41P59536 307 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 MEX3BQ6ZN04 569 aaKnown RBP22.93■■□□□ 1.26
TRIM28-204ENST00000594806 DEF8Q6ZN54 512 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 FKBP9P1Q75LS8 142 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 KTI12Q96EK9 354 aaPredicted RBP22.93■■□□□ 1.26
TRIM28-204ENST00000594806 DNAJA3Q96EY1 480 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 PTDSS2Q9BVG9 487 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 SLC19A3Q9BZV2 496 aa22.93■■□□□ 1.26
TRIM28-204ENST00000594806 DCAF13Q9NV06 445 aaKnown RBP22.93■■□□□ 1.26
TRIM28-204ENST00000594806 ZNF716A6NP11 495 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 IFNW1P05000 195 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 NCK1P16333 377 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 TCN1P20061 433 aaPredicted RBP22.92■■□□□ 1.26
TRIM28-204ENST00000594806 TNFRSF1BP20333 461 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 GTF2E2P29084 291 aaKnown RBP22.92■■□□□ 1.26
TRIM28-204ENST00000594806 RPS5P46782 204 aaKnown RBP22.92■■□□□ 1.26
TRIM28-204ENST00000594806 OTUD3Q5T2D3 398 aaPredicted RBP22.92■■□□□ 1.26
TRIM28-204ENST00000594806 TTC33Q6PID6 262 aaPredicted RBP22.92■■□□□ 1.26
TRIM28-204ENST00000594806 BEND4Q6ZU67 534 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 GALNT5Q7Z7M9 940 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 ZNF610Q8N9Z0 462 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 SLC41A3Q96GZ6 507 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 OPN3Q9H1Y3 402 aaPredicted RBP22.92■■□□□ 1.26
TRIM28-204ENST00000594806 GALNT8Q9NY28 637 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 SLC7A7Q9UM01 511 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 PRPF19Q9UMS4 504 aaKnown RBP22.92■■□□□ 1.26
TRIM28-204ENST00000594806 SNX13Q9Y5W8 968 aa22.92■■□□□ 1.26
TRIM28-204ENST00000594806 LYPD3O95274 346 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 ZNF474Q6S9Z5 364 aaPredicted RBP22.91■■□□□ 1.26
TRIM28-204ENST00000594806 RINLQ6ZS11 566 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 VTCN1Q7Z7D3 282 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 CCDC103Q8IW40 242 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 TAAR8Q969N4 342 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 HSH2DQ96JZ2 352 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 PRRC1Q96M27 445 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 ZNF426Q9BUY5 554 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 MUC13Q9H3R2 512 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 RIMS3Q9UJD0 308 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 RASD1Q9Y272 281 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 B3GALT5Q9Y2C3 310 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 CORINQ9Y5Q5 1042 aa22.91■■□□□ 1.26
TRIM28-204ENST00000594806 UTP20O75691 2785 aaKnown RBP22.91■■□□□ 1.26
TRIM28-204ENST00000594806 AKR7A3O95154 331 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 THY1P04216 161 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 KLK2P20151 261 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 CD79BP40259 229 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 RBM34P42696 430 aaKnown RBP22.9■■□□□ 1.26
TRIM28-204ENST00000594806 ST3GAL3Q11203 375 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 SLC17A1Q14916 467 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 TMEM225Q6GV28 225 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 GDF7Q7Z4P5 450 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 TMEM99Q8N816 258 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 FAM156AQ8NDB6 213 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 SLC25A36Q96CQ1 311 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 NSMCE2Q96MF7 247 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 HS6ST2Q96MM7 605 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 ZNF300Q96RE9 604 aaPredicted RBP22.9■■□□□ 1.26
TRIM28-204ENST00000594806 TAS2R1Q9NYW7 299 aa22.9■■□□□ 1.26
TRIM28-204ENST00000594806 FREM1Q5H8C1 2179 aa22.89■■□□□ 1.26
TRIM28-204ENST00000594806 ZNF814B7Z6K7 855 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 UBOX5O94941 541 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 CNOT4O95628 575 aaKnown RBP22.89■■□□□ 1.25
TRIM28-204ENST00000594806 MT-ATP6P00846 226 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 PIN1Q13526 163 aaPredicted RBP22.89■■□□□ 1.25
TRIM28-204ENST00000594806 HIST2H2BCQ6DN03 193 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 NUFIP2Q7Z417 695 aaKnown RBP22.89■■□□□ 1.25
TRIM28-204ENST00000594806 TSPYL5Q86VY4 417 aaPredicted RBP22.89■■□□□ 1.25
TRIM28-204ENST00000594806 SCAIQ8N9R8 606 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 ADPRHL1Q8NDY3 354 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 MARVELD3Q96A59 401 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 AMBRA1Q9C0C7 1298 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 C12orf49Q9H741 205 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 PARPBPQ9NWS1 579 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 KCNN3Q9UGI6 736 aa22.89■■□□□ 1.25
TRIM28-204ENST00000594806 NOSIPQ9Y314 301 aaKnown RBP22.89■■□□□ 1.25
TRIM28-204ENST00000594806 HTR3EA5X5Y0 456 aa22.88■■□□□ 1.25
TRIM28-204ENST00000594806 IGF2P01344 180 aa22.88■■□□□ 1.25
TRIM28-204ENST00000594806 POU2F1P14859 743 aa22.88■■□□□ 1.25
TRIM28-204ENST00000594806 OR3A2P47893 321 aa22.88■■□□□ 1.25
TRIM28-204ENST00000594806 P2RY4P51582 365 aa22.88■■□□□ 1.25
TRIM28-204ENST00000594806 POU4F3Q15319 338 aa22.88■■□□□ 1.25
TRIM28-204ENST00000594806 TFAP2EQ6VUC0 442 aa22.88■■□□□ 1.25
TRIM28-204ENST00000594806 POP5Q969H6 163 aaKnown RBP22.88■■□□□ 1.25
TRIM28-204ENST00000594806 PRSS27Q9BQR3 290 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms