RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 STX19Q8N4C7 294 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 ZNF248Q8NDW4 579 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 TMEM163Q8TC26 289 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 PLEKHA8Q96JA3 519 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 PTDSS2Q9BVG9 487 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 OR11A1Q9GZK7 315 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 NANSQ9NR45 359 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 MSRB2Q9Y3D2 182 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 RPL36Q9Y3U8 105 aaKnown RBP13.73□□□□□ -0.21
VRK3-207ENST00000594092 ZFHX4Q86UP3 3567 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 BHLHE40O14503 412 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 KLK10O43240 276 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 CDK1P06493 297 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 ASAH2BP0C7U1 165 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 CNR1P21554 472 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 DPP4P27487 766 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 DSCR4P56555 118 aaPredicted RBP13.72□□□□□ -0.21
VRK3-207ENST00000594092 GPR85P60893 370 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 RPS4XP62701 263 aaKnown RBP13.72□□□□□ -0.21
VRK3-207ENST00000594092 EFNB1P98172 346 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 SLC43A2Q8N370 569 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 LRR1Q96L50 414 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 ZNF552Q9H707 407 aaPredicted RBP13.72□□□□□ -0.21
VRK3-207ENST00000594092 FKRPQ9H9S5 495 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 CEPT1Q9Y6K0 416 aa13.72□□□□□ -0.21
VRK3-207ENST00000594092 LRRC3CA6NJW4 275 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 SNTNA6NMZ2 147 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 H3BSA7 217 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 CDK2AP1O14519 115 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 SURF4O15260 269 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 ZNF208O43345 1280 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 CBR3O75828 277 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 NDUFB2O95178 105 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 FADS2O95864 444 aaKnown RBP13.71□□□□□ -0.21
VRK3-207ENST00000594092 PIPP12273 146 aaPredicted RBP13.71□□□□□ -0.21
VRK3-207ENST00000594092 IL11P20809 199 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 EIF1P41567 113 aaKnown RBP13.71□□□□□ -0.21
VRK3-207ENST00000594092 CCL11P51671 97 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 MFAP5Q13361 173 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 DEFB109BQ30KR1 87 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 GXYLT1Q4G148 440 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 C5orf46Q6UWT4 87 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 CCDC81Q6ZN84 652 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 OR5M1Q8NGP8 315 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 MUL1Q969V5 352 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 ZBTB8AQ96BR9 441 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 DNAJA3Q96EY1 480 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 SIGLEC11Q96RL6 698 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 IFT27Q9BW83 186 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 ZNF229Q9UJW7 825 aa13.71□□□□□ -0.21
VRK3-207ENST00000594092 ZNF99A8MXY4 864 aaPredicted RBP13.71□□□□□ -0.22
VRK3-207ENST00000594092 ZIC3O60481 467 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 HK1P19367 917 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 ADH6P28332 368 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 SLC6A6P31641 620 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 GRK5P34947 590 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 MAP2K6P52564 334 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 MLLT10P55197 1068 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 ST3GAL4Q11206 333 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 SYT14P1Q58G82 188 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 FAM69AQ5T7M9 428 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 LNX2Q8N448 690 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 OR13F1Q8NGS4 319 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 SNIP1Q8TAD8 396 aaKnown RBP13.71□□□□□ -0.22
VRK3-207ENST00000594092 RORBQ92753 470 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 RELTQ969Z4 430 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 HES7Q9BYE0 225 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 RSL24D1Q9UHA3 163 aaKnown RBP13.71□□□□□ -0.22
VRK3-207ENST00000594092 DKKL1Q9UK85 242 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 BAIAP2Q9UQB8 552 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 HIF3AQ9Y2N7 669 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 GPR52Q9Y2T5 361 aa13.71□□□□□ -0.22
VRK3-207ENST00000594092 PIEZO1Q92508 2521 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 PINLYPA6NC86 204 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 OR5H15A6NDH6 313 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 AHSA1O95433 338 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 MT-ATP6P00846 226 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 STSP08842 583 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 MAP2K4P45985 399 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 SLC15A1P46059 708 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 FOXO1Q12778 655 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 TMEM44Q2T9K0 475 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 CNPY1Q3B7I2 92 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 GTF2IRD2BQ6EKJ0 949 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 BCDIN3DQ7Z5W3 292 aaKnown RBP13.7□□□□□ -0.22
VRK3-207ENST00000594092 GTF2IRD2Q86UP8 949 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
VRK3-207ENST00000594092 GTPBP8Q8N3Z3 284 aaPredicted RBP13.7□□□□□ -0.22
VRK3-207ENST00000594092 MDS2Q8NDY4 140 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 ATP6V1C2Q8NEY4 427 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 FDCSPQ8NFU4 85 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 MOSPD2Q8NHP6 518 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 FAR1Q8WVX9 515 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 FCGR1BQ92637 280 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 SLC25A36Q96CQ1 311 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 DDIT4LQ96D03 193 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 ARL5BQ96KC2 179 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 ZNF582Q96NG8 517 aaPredicted RBP13.7□□□□□ -0.22
VRK3-207ENST00000594092 FAM173AQ9BQD7 235 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 RNF32Q9H0A6 362 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms