RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ALDOCP09972 364 aaKnown RBP8.36□□□□□ -1.07
BRCA1-226ENST00000591534 DANCRP0C864 163 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 ZCCHC18P0CG32 403 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 ACP2P11117 423 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 PGM1P36871 562 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 FRKP42685 505 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-226ENST00000591534 BNIP2Q12982 314 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 SELENBP1Q13228 472 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 CBFBQ13951 182 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 NFYCQ13952 458 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 PPA1Q15181 289 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 TAB1Q15750 504 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 DUSP5Q16690 384 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 FAM174BQ3ZCQ3 159 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 SPDYE7PQ495Y7 208 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 MTX3Q5HYI7 312 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 TIMM23BQ5SRD1 257 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 ERICH5Q6P6B1 374 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 KLHL17Q6TDP4 642 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 ASRGL1Q7L266 308 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 HIPK1Q86Z02 1210 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 OR56A1Q8NGH5 318 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 FBXO30Q8TB52 745 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 ADAMTS15Q8TE58 950 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 ZFP90Q8TF47 636 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 STMN2Q93045 179 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 COQ8BQ96D53 544 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 C1orf50Q9BV19 199 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 DUSP26Q9BV47 211 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 PIGUQ9H490 435 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 CISD1Q9NZ45 108 aaKnown RBP8.36□□□□□ -1.07
BRCA1-226ENST00000591534 EMC3Q9P0I2 261 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 CGGBP1Q9UFW8 167 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-226ENST00000591534 CDC42EP3Q9UKI2 254 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 MGAT4BQ9UQ53 548 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 MAGED1Q9Y5V3 778 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-226ENST00000591534 NUP214P35658 2090 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-226ENST00000591534 CSPG4Q6UVK1 2322 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 A0A096LPI6 279 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 TRAV20A0A0B4J274 112 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 A8MV72 311 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 PRODHO43272 600 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 EIF4E2O60573 245 aaKnown RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 HMGN2P05204 90 aaKnown RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 GGT1P19440 569 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ENPP1P22413 925 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 FKBP2P26885 142 aaKnown RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ACVR1BP36896 505 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 CDKN1AP38936 164 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 OR3A2P47893 321 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 NUDT6P53370 316 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ATP12AP54707 1039 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 CSNK2A1P68400 391 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF117Q03924 483 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 BSPH1Q075Z2 132 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 RASGEF1BQ0VAM2 473 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 SF3A3Q12874 501 aaKnown RBP eCLIP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 FAPQ12884 760 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 TRAP1Q12931 704 aaKnown RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 FOXF1Q12946 379 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 FADDQ13158 208 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 PDE7AQ13946 482 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 LASP1Q14847 261 aaKnown RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 PTGR1Q14914 329 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 STK11Q15831 433 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 PGS1Q32NB8 556 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 KLHL26Q53HC5 615 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 C6orf10Q5SRN2 563 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 CDC73Q6P1J9 531 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 CLEC2AQ6UVW9 174 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 TMEM108Q6UXF1 575 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 NUFIP2Q7Z417 695 aaKnown RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 GALNT5Q7Z7M9 940 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 RIMKLAQ8IXN7 391 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF100Q8IYN0 542 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF619Q8N2I2 560 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 TMCO5AQ8N6Q1 288 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ATP6V1C2Q8NEY4 427 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 OR5W2Q8NH69 310 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 POC1BQ8TC44 478 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 TMEM234Q8WY98 164 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 LRRC58Q96CX6 371 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ZHX1-C8orf76Q96EF9 292 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 FAM120BQ96EK7 910 aaKnown RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 GIMAP5Q96F15 307 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 OTUB1Q96FW1 271 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 C16orf58Q96GQ5 468 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 RCC1LQ96I51 464 aaKnown RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 PANX1Q96RD7 426 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ECSITQ9BQ95 431 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ACTRT3Q9BYD9 372 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 TRIM2Q9C040 744 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 BCO1Q9HAY6 547 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 CACYBPQ9HB71 228 aaKnown RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ARL8BQ9NVJ2 186 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 TAS2R1Q9NYW7 299 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 POU2F3Q9UKI9 436 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 CARD8Q9Y2G2 431 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 DTNAQ9Y4J8 743 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms