RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 SLC16A1P53985 500 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 PCBP3P57721 371 aaKnown RBP9.94□□□□□ -0.82
SMAD4-211ENST00000590499 MTPNP58546 118 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 RASGEF1BQ0VAM2 473 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 SF3A3Q12874 501 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMAD4-211ENST00000590499 KLF10Q13118 480 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 NFYCQ13952 458 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 PDK3Q15120 406 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 TESK1Q15569 626 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 EXOC3L2Q2M3D2 409 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 COQ5Q5HYK3 327 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 TMEM201Q5SNT2 666 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 ANKRD34AQ69YU3 496 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 WBP2NLQ6ICG8 309 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 BEND4Q6ZU67 534 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 C10orf82Q8WW14 230 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 C3orf49Q96BT1 292 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 ZNF300Q96RE9 604 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-211ENST00000590499 ARMC7Q9H6L4 198 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 C7orf69Q9H7B7 122 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 KAT8Q9H7Z6 458 aaKnown RBP9.94□□□□□ -0.82
SMAD4-211ENST00000590499 MRGBPQ9NV56 204 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 KLHL28Q9NXS3 571 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 TMEM181Q9P2C4 612 aa9.94□□□□□ -0.82
SMAD4-211ENST00000590499 RAI1Q7Z5J4 1906 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-211ENST00000590499 ENO4A6NNW6 628 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 TPST1O60507 370 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 RAMP1O60894 148 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 NPIPB7O75200 414 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 THBDP07204 575 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 CRYGSP22914 178 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 SLC6A2P23975 617 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 HTR2AP28223 471 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 LOXP28300 417 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-211ENST00000590499 ADSLP30566 484 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-211ENST00000590499 OR3A2P47893 321 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 KCNJ5P48544 419 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 COPZ1P61923 177 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 HOXC5Q00444 222 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 RBBP4Q09028 425 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 CAPRIN1Q14444 709 aaKnown RBP9.93□□□□□ -0.82
SMAD4-211ENST00000590499 TRMT5Q32P41 509 aaKnown RBP9.93□□□□□ -0.82
SMAD4-211ENST00000590499 GLIPR1L2Q4G1C9 344 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 C6orf89Q6UWU4 347 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 ATG4DQ86TL0 474 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-211ENST00000590499 STK32CQ86UX6 486 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 KRT73Q86Y46 540 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 CADM2Q8N3J6 435 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 C11orf65Q8NCR3 313 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 HIPK4Q8NE63 616 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 DDIT4LQ96D03 193 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 DNAJA3Q96EY1 480 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 MED18Q9BUE0 208 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 KRTAP4-2Q9BYR5 136 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 POTEKPQ9BYX7 375 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 KLHL4Q9C0H6 718 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 OR10A4Q9H209 315 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 LIME1Q9H400 295 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 PLEKHF2Q9H8W4 249 aa9.93□□□□□ -0.82
SMAD4-211ENST00000590499 CACYBPQ9HB71 228 aaKnown RBP9.93□□□□□ -0.82
SMAD4-211ENST00000590499 LIPT2A6NK58 231 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 BBIP1A8MTZ0 92 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 SLC22A2O15244 555 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 FZD7O75084 574 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 MFN2O95140 757 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 PPP3CBP16298 524 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 AQP1P29972 269 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 NTF4P34130 210 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 OR2B6P58173 313 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 SLC35A1P78382 337 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 DMTNQ08495 405 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 BNIP2Q12982 314 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 POU4F3Q15319 338 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 REP15Q6BDI9 236 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 FDX2Q6P4F2 183 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 PAQR6Q6TCH4 344 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 CXorf67Q86X51 503 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-211ENST00000590499 CALHM3Q86XJ0 350 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 CCDC103Q8IW40 242 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 LSMEM1Q8N8F7 131 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 PIGXQ8TBF5 258 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 LRRC58Q96CX6 371 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 ZHX1-C8orf76Q96EF9 292 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 ZNF607Q96SK3 696 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 WFDC6Q9BQY6 131 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 SPATA5L1Q9BVQ7 753 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 C6orf203Q9P0P8 240 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-211ENST00000590499 PRSS50Q9UI38 385 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 ST6GALNAC2Q9UJ37 374 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 ANGPT4Q9Y264 503 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 GPR52Q9Y2T5 361 aa9.92□□□□□ -0.82
SMAD4-211ENST00000590499 MED13LQ71F56 2210 aa9.91□□□□□ -0.82
SMAD4-211ENST00000590499 ALPK2Q86TB3 2170 aa9.91□□□□□ -0.82
SMAD4-211ENST00000590499 A0A1B0GWA3 101 aa9.91□□□□□ -0.82
SMAD4-211ENST00000590499 MEGF11A6BM72 1044 aa9.91□□□□□ -0.82
SMAD4-211ENST00000590499 PRORSD1PA6NEY8 169 aa9.91□□□□□ -0.82
SMAD4-211ENST00000590499 A8MVM7 634 aa9.91□□□□□ -0.82
SMAD4-211ENST00000590499 FTCDNL1E5RQL4 147 aa9.91□□□□□ -0.82
SMAD4-211ENST00000590499 CASKO14936 926 aa9.91□□□□□ -0.82
SMAD4-211ENST00000590499 TPST2O60704 377 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms