RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TAB1Q15750 504 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 ACKR1Q16570 336 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 DEFB113Q30KQ7 82 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 TRMT5Q32P41 509 aaKnown RBP10.68□□□□□ -0.7
TPM4-212ENST00000590180 ALG10BQ5I7T1 473 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 REP15Q6BDI9 236 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 ULK3Q6PHR2 472 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 SPNS3Q6ZMD2 512 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 AAED1Q7RTV5 226 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 PATL1Q86TB9 770 aaKnown RBP10.68□□□□□ -0.7
TPM4-212ENST00000590180 COMTD1Q86VU5 262 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 SLC30A8Q8IWU4 369 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 LSMEM1Q8N8F7 131 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 PCYOX1LQ8NBM8 494 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 OR9K2Q8NGE7 335 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 DNAJA4Q8WW22 397 aaPredicted RBP10.68□□□□□ -0.7
TPM4-212ENST00000590180 MUCL1Q96DR8 90 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 KTI12Q96EK9 354 aaPredicted RBP10.68□□□□□ -0.7
TPM4-212ENST00000590180 SLC47A1Q96FL8 570 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 MCHR1Q99705 422 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 GID8Q9NWU2 228 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 ASB6Q9NWX5 421 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 SLC9A8Q9Y2E8 581 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 FLVCR1Q9Y5Y0 555 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 CAPN7Q9Y6W3 813 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 ARID1AO14497 2285 aa10.68□□□□□ -0.7
TPM4-212ENST00000590180 ITPR3Q14573 2671 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 AQP7P3A6NL99 342 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 BBIP1A8MTZ0 92 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 TMEM229AB2RXF0 380 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 OR2T1O43869 369 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 NPIPB7O75200 414 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 RAD51DO75771 328 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 PLAUP00749 431 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 PNMTP11086 282 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 CD53P19397 219 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 GGT1P19440 569 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 HTR2AP28223 471 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 DUSP7Q16829 419 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 VMACQ2NL98 169 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 RABL3Q5HYI8 236 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 COQ5Q5HYK3 327 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 INTS11Q5TA45 600 aaKnown RBP10.67□□□□□ -0.7
TPM4-212ENST00000590180 C9orf135Q5VTT2 229 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 RANBP3LQ86VV4 465 aaPredicted RBP10.67□□□□□ -0.7
TPM4-212ENST00000590180 P3H2Q8IVL5 708 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 KDM8Q8N371 416 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 ZNF433Q8N7K0 673 aaPredicted RBP10.67□□□□□ -0.7
TPM4-212ENST00000590180 MFSD8Q8NHS3 518 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 MBD6Q96DN6 1003 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 ZNF317Q96PQ6 595 aaPredicted RBP10.67□□□□□ -0.7
TPM4-212ENST00000590180 WFDC6Q9BQY6 131 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 SF3B5Q9BWJ5 86 aaKnown RBP10.67□□□□□ -0.7
TPM4-212ENST00000590180 EVA1AQ9H8M9 152 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 C12orf10Q9HB07 376 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 ARMCX1Q9P291 453 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 TESQ9UGI8 421 aaKnown RBP10.67□□□□□ -0.7
TPM4-212ENST00000590180 CADP27708 2225 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 MAP1AP78559 2803 aaPredicted RBP10.67□□□□□ -0.7
TPM4-212ENST00000590180 CSMD2Q7Z408 3487 aa10.67□□□□□ -0.7
TPM4-212ENST00000590180 HIVEP1P15822 2718 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 M0R3H8 397 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 CLOCKO15516 846 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 TPST2O60704 377 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 CCDC22O60826 627 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 KRT33AO76009 404 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 VAMP5O95183 116 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 LGI1O95970 557 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 NPPAP01160 153 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 CD3EP07766 207 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 CBLP22681 906 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 LOXP28300 417 aaPredicted RBP10.66□□□□□ -0.7
TPM4-212ENST00000590180 PCGF2P35227 344 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 GZMMP51124 257 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 PCBP3P57721 371 aaKnown RBP10.66□□□□□ -0.7
TPM4-212ENST00000590180 IL1RL1Q01638 556 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 EGR4Q05215 589 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 PPA1Q15181 289 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 TSPO2Q5TGU0 170 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 ZNF704Q6ZNC4 412 aaPredicted RBP10.66□□□□□ -0.7
TPM4-212ENST00000590180 NET1Q7Z628 596 aaPredicted RBP10.66□□□□□ -0.7
TPM4-212ENST00000590180 C10orf53Q8N6V4 93 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 POU5F2Q8N7G0 328 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 ZIC4Q8N9L1 334 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 OR8J3Q8NGG0 315 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 VANGL1Q8TAA9 524 aaPredicted RBP10.66□□□□□ -0.7
TPM4-212ENST00000590180 C10orf82Q8WW14 230 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 SLC38A4Q969I6 547 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 PIGTQ969N2 578 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 TAAR8Q969N4 342 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 ZNF385AQ96PM9 386 aaKnown RBP10.66□□□□□ -0.7
TPM4-212ENST00000590180 ALPK1Q96QP1 1244 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 ELAC2Q9BQ52 826 aaKnown RBP10.66□□□□□ -0.7
TPM4-212ENST00000590180 ESRP2Q9H6T0 727 aaKnown RBP10.66□□□□□ -0.7
TPM4-212ENST00000590180 SLC7A10Q9NS82 523 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 RASD1Q9Y272 281 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 MED13LQ71F56 2210 aa10.66□□□□□ -0.7
TPM4-212ENST00000590180 TRAV36DV7A0A075B6V5 113 aa10.65□□□□□ -0.7
TPM4-212ENST00000590180 A0A087WUJ7 227 aa10.65□□□□□ -0.7
TPM4-212ENST00000590180 CPSF4LA6NMK7 179 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms