RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SLC25A1P53007 311 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 PLET1Q6UQ28 207 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 NR2C2APQ86WQ0 139 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 D2HGDHQ8N465 521 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 ZNF321PQ8N8H1 164 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 OR6F1Q8NGZ6 308 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 ZNF721Q8TF20 911 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 SMAP2Q8WU79 429 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 THAP4Q8WY91 577 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 PHYHIPQ92561 330 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 DAZLQ92904 295 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 ADIPOR1Q96A54 375 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 PELI1Q96FA3 418 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.5■□□□□ 0.397e-7■■■■□ 23.7
PRKCSH-209ENST00000589838 MMP28Q9H239 520 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 ZNF304Q9HCX3 659 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 KLHL1Q9NR64 748 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 RBFOX1Q9NWB1 397 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 MOKQ9UQ07 419 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 NUP210LQ5VU65 1888 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 OR6C68A6NDL8 312 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 BLOC1S5-TXNDC5H3BN57 136 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 TFECO14948 347 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 GPRIN2O60269 458 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 DDAH2O95865 285 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 RAB3BP20337 219 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 IL12BP29460 328 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 RBMS1P29558 406 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 NAA10P41227 235 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 GPLD1P80108 840 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 RPTNQ6XPR3 784 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 KMT5CQ86Y97 462 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 SPEM1Q8N4L4 309 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 SCAIQ8N9R8 606 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 ZNF563Q8TA94 476 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 TSLPQ969D9 159 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 MFRPQ9BY79 579 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 PPIL3Q9H2H8 161 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 SEMA5BQ9P283 1151 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 NCDNQ9UBB6 729 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 RASD1Q9Y272 281 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 UNC80Q8N2C7 3258 aa17.5■□□□□ 0.39
PRKCSH-209ENST00000589838 XIRP2A4UGR9 3374 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 TCRBV16S1A1N1A0A5B0 115 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 HIST1H2ABP04908 130 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 ATXN8OSP0DMR3 200 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 GLB1P16278 677 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 NPR2P20594 1047 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 DDOSTP39656 456 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 KIR2DL3P43628 341 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 HCCSP53701 268 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 DBPQ10586 325 aaPredicted RBP17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 EMC4Q5J8M3 183 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 LEG1Q6P5S2 330 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 HIST3H2AQ7L7L0 130 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 DUSP18Q8NEJ0 188 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 OR51L1Q8NGJ5 315 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 OR1L3Q8NH93 324 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 MOSPD2Q8NHP6 518 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 HIST1H2ACQ93077 130 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 RASD2Q96D21 266 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 FOXQ1Q9C009 403 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 MMP25Q9NPA2 562 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 GNG8Q9UK08 70 aa17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 COL5A1P20908 1838 aaPredicted RBP17.49■□□□□ 0.39
PRKCSH-209ENST00000589838 TRBV2A0A0J9YWF9 115 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 A0A1W2PRG6 482 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 LYRM1O43325 122 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 OIP5O43482 229 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 EDNRAP25101 427 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 THBS2P35442 1172 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 AQP2P41181 271 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 MADCAM1Q13477 382 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 ALG10Q5BKT4 473 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 FAM27D1Q5T7N8 215 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 SAMD12Q8N8I0 201 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 OR6K6Q8NGW6 343 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 DNASE2BQ8WZ79 361 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 TP53INP1Q96A56 240 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 ADOQ96SZ5 270 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 KCNJ15Q99712 375 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 NEK6Q9HC98 313 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 DHCR7Q9UBM7 475 aaKnown RBP17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 WNT16Q9UBV4 365 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 COPS7AQ9UBW8 275 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 TEKT2Q9UIF3 430 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 POU2F3Q9UKI9 436 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 TEX13CA0A0J9YWL9 993 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 FAM240BA0A1B0GVZ2 78 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 A0A1W2PQD3 144 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 TO15178 435 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 EIF4E2O60573 245 aaKnown RBP17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 TXNDC12O95881 172 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 AFF3P51826 1226 aaKnown RBP17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 CTXN1P60606 82 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 HACD4Q5VWC8 232 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 CBLN3Q6UW01 205 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 APOOLQ6UXV4 268 aa17.48■□□□□ 0.39
PRKCSH-209ENST00000589838 TRILQ7L0X0 811 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms