RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 HS3ST5Q8IZT8 346 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 SVOPLQ8N434 492 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 OR9Q2Q8NGE9 314 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 CPNE4Q96A23 557 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-211ENST00000589753 ZHX1-C8orf76Q96EF9 292 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 FAM46AQ96IP4 442 aaKnown RBP13.61□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF845Q96IR2 970 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-211ENST00000589753 MOGAT1Q96PD6 335 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 SRXN1Q9BYN0 137 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 FKRPQ9H9S5 495 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 NANSQ9NR45 359 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 STX18Q9P2W9 335 aaKnown RBP13.61□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF229Q9UJW7 825 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF835Q9Y2P0 537 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 BSNQ9UPA5 3926 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 ATRXP46100 2492 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF407Q9C0G0 2248 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 SAC3D1A6NKF1 404 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 FIGNL2A6NMB9 653 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 CLCA1A8K7I4 914 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 EFCAB9A8MZ26 197 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 EIF1BO60739 113 aaKnown RBP13.6□□□□□ -0.23
ATG4D-211ENST00000589753 WDR1O75083 606 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 FZD7O75084 574 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 C1QL1O75973 258 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 SYNGR4O95473 234 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 SAGP10523 405 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-211ENST00000589753 GABRA1P14867 456 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 FUT1P19526 365 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 MAKP20794 623 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 GRPRP30550 384 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 GPR4P46093 362 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 NUP107P57740 925 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 TLE1Q04724 770 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 EMC4Q5J8M3 183 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF770Q6IQ21 691 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-211ENST00000589753 PPP4R4Q6NUP7 873 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 C1orf94Q6P1W5 598 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 PGBD2Q6P3X8 592 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 Q6ZPB1 254 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-211ENST00000589753 AQP11Q8NBQ7 271 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 GNPDA2Q8TDQ7 276 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 LIPHQ8WWY8 451 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 SDCCAG3Q96C92 435 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 PSD2Q9BQI7 771 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 ASPNQ9BXN1 380 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 MCTS1Q9ULC4 181 aaKnown RBP13.6□□□□□ -0.23
ATG4D-211ENST00000589753 OAZ3Q9UMX2 235 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 MGAT4BQ9UQ53 548 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 CORINQ9Y5Q5 1042 aa13.6□□□□□ -0.23
ATG4D-211ENST00000589753 MAGED1Q9Y5V3 778 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-211ENST00000589753 M0R082 166 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 AKR7A3O95154 331 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 GASTP01350 101 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 HIST1H2ABP04908 130 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 ASAH2BP0C7U1 165 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 ENPP1P22413 925 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 PRKACGP22612 351 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 FPR3P25089 353 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 PTGER4P35408 488 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 SLC9A3P48764 834 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 AGFG1P52594 562 aaKnown RBP13.59□□□□□ -0.23
ATG4D-211ENST00000589753 RIPK1Q13546 671 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 PON3Q15166 354 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF239Q16600 458 aaKnown RBP13.59□□□□□ -0.23
ATG4D-211ENST00000589753 PAQR6Q6TCH4 344 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 HIST3H2AQ7L7L0 130 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 ADGRE4PQ86SQ3 457 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 STK32CQ86UX6 486 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 LRRC17Q8N6Y2 441 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 SCAIQ8N9R8 606 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 OR5J2Q8NH18 312 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF417Q8TAU3 575 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 HIST1H2ACQ93077 130 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 TRIB1Q96RU8 372 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF587Q96SQ5 575 aaPredicted RBP13.59□□□□□ -0.23
ATG4D-211ENST00000589753 FEVQ99581 238 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 NAA11Q9BSU3 229 aaPredicted RBP13.59□□□□□ -0.23
ATG4D-211ENST00000589753 TP63Q9H3D4 680 aaPredicted RBP13.59□□□□□ -0.23
ATG4D-211ENST00000589753 RNPEPL1Q9HAU8 725 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 MRPL39Q9NYK5 338 aaKnown RBP13.59□□□□□ -0.23
ATG4D-211ENST00000589753 MED12Q93074 2177 aa13.59□□□□□ -0.23
ATG4D-211ENST00000589753 IGSF10Q6WRI0 2623 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 IGHV3-15A0A0B4J1V0 119 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 UNC119BA6NIH7 251 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 SLC22A20A6NK97 555 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 CDC42EP2O14613 210 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 SMAD9O15198 467 aaKnown RBP13.58□□□□□ -0.24
ATG4D-211ENST00000589753 KLF4O43474 513 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 ADAP00813 363 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 HOXD4P09016 255 aaPredicted RBP13.58□□□□□ -0.24
ATG4D-211ENST00000589753 ANXA8P13928 327 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 POU2F1P14859 743 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 ACVR2AP27037 513 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 GSSP48637 474 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 H3F3AP84243 136 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 TSPAN31Q12999 210 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 PMS2P3Q13401 168 aa13.58□□□□□ -0.24
ATG4D-211ENST00000589753 ACSF3Q4G176 576 aaPredicted RBP13.58□□□□□ -0.24
ATG4D-211ENST00000589753 OTUD3Q5T2D3 398 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms