RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZSWIM7Q19AV6 140 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 TBRG1Q3YBR2 411 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 FAM174BQ3ZCQ3 159 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 LRRC74BQ6ZQY2 392 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 OR1K1Q8NGR3 316 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 WDR60Q8WVS4 1066 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCDC43-204ENST00000588687 ALKBH3Q96Q83 286 aaPredicted RBP16.02■□□□□ 0.16
CCDC43-204ENST00000588687 SORT1Q99523 831 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 PIF1Q9H611 641 aa16.02■□□□□ 0.16
CCDC43-204ENST00000588687 MYOZ1Q9NP98 299 aaPredicted RBP16.02■□□□□ 0.16
CCDC43-204ENST00000588687 CFAP73A6NFT4 308 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 E9PBE3 544 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 FRS3O43559 492 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 LGI1O95970 557 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 ZNF23P17027 643 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 CDH2P19022 906 aaPredicted RBP16.01■□□□□ 0.15
CCDC43-204ENST00000588687 SERPINF1P36955 418 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 CDKN2CP42773 168 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 CEACAM7Q14002 265 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 DPY19L1Q2PZI1 675 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 KLHL24Q6TFL4 600 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 AAED1Q7RTV5 226 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 MYPOPQ86VE0 399 aaPredicted RBP16.01■□□□□ 0.15
CCDC43-204ENST00000588687 C3orf49Q96BT1 292 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 PLK3Q9H4B4 646 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 RLIMQ9NVW2 624 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 BTNL2Q9UIR0 455 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 HAO1Q9UJM8 370 aa16.01■□□□□ 0.15
CCDC43-204ENST00000588687 ARPC4-TTLL3A0A0A6YYG9 625 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 CDHR4A6H8M9 788 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 NPIPB7O75200 414 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 SERPINE1P05121 402 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 GPIP06744 558 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 IGFBP1P08833 259 aaPredicted RBP16■□□□□ 0.15
CCDC43-204ENST00000588687 ALDOCP09972 364 aaKnown RBP16■□□□□ 0.15
CCDC43-204ENST00000588687 CECR9P0C854 216 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 CALCRP30988 508 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 CHI3L1P36222 383 aaPredicted RBP16■□□□□ 0.15
CCDC43-204ENST00000588687 ACAA2P42765 397 aaKnown RBP16■□□□□ 0.15
CCDC43-204ENST00000588687 SELENOPP49908 381 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 PPOXP50336 477 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 NAAAQ02083 359 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 OR7A5Q15622 319 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 C3orf36Q3SXR2 165 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 COX20Q5RI15 118 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 LRRC34Q8IZ02 419 aa16■□□□□ 0.15
CCDC43-204ENST00000588687 BCL2L2Q92843 193 aaPredicted RBP16■□□□□ 0.15
CCDC43-204ENST00000588687 AURKBQ96GD4 344 aaPredicted RBP16■□□□□ 0.15
CCDC43-204ENST00000588687 B9A039 149 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 IGKV3-15P01624 115 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 OR4A8P0C604 315 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 GIFP27352 417 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 IL12AP29459 219 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 MVDP53602 400 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 CLNS1AP54105 237 aaKnown RBP15.99■□□□□ 0.15
CCDC43-204ENST00000588687 ABCE1P61221 599 aaKnown RBP15.99■□□□□ 0.15
CCDC43-204ENST00000588687 OGFOD2Q6N063 350 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 CREB3L2Q70SY1 520 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 SLC46A3Q7Z3Q1 461 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 SPATA19Q7Z5L4 167 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 EPHX4Q8IUS5 362 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 VPS37AQ8NEZ2 397 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 MAGEE2Q8TD90 523 aaPredicted RBP15.99■□□□□ 0.15
CCDC43-204ENST00000588687 CHST2Q9Y4C5 530 aa15.99■□□□□ 0.15
CCDC43-204ENST00000588687 CCDC154A6NI56 674 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 TMEM229AB2RXF0 380 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 NR5A2O00482 541 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 FZD7O75084 574 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 DBIP07108 87 aaKnown RBP15.98■□□□□ 0.15
CCDC43-204ENST00000588687 IL2RGP31785 369 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 TUBA1BP68363 451 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 TUBA4AP68366 448 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 TXNL4AP83876 142 aaKnown RBP15.98■□□□□ 0.15
CCDC43-204ENST00000588687 HGFACQ04756 655 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 BNIP2Q12982 314 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 CHI3L2Q15782 390 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 GSTA3Q16772 222 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 CR1LQ2VPA4 569 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 ANKRD16Q6P6B7 361 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 ZNF836Q6ZNA1 936 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 TUBA1AQ71U36 451 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 ABHD12BQ7Z5M8 362 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-204ENST00000588687 GPAT4Q86UL3 456 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 NUDCD3Q8IVD9 361 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 FAM169BQ8N8A8 192 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 NUP37Q8NFH4 326 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 ZNF317Q96PQ6 595 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-204ENST00000588687 VRK1Q99986 396 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-204ENST00000588687 MTHFD2LQ9H903 347 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-204ENST00000588687 SLC6A13Q9NSD5 602 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 TMEM45AQ9NWC5 275 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 RAP2CQ9Y3L5 183 aa15.98■□□□□ 0.15
CCDC43-204ENST00000588687 LRP5LA4QPB2 252 aa15.97■□□□□ 0.15
CCDC43-204ENST00000588687 ZNF503-AS2A6NEH8 195 aa15.97■□□□□ 0.15
CCDC43-204ENST00000588687 FTCDNL1E5RQL4 147 aa15.97■□□□□ 0.15
CCDC43-204ENST00000588687 ZNF587BE7ETH6 402 aa15.97■□□□□ 0.15
CCDC43-204ENST00000588687 UPK3AO75631 287 aa15.97■□□□□ 0.15
CCDC43-204ENST00000588687 STAMBPO95630 424 aa15.97■□□□□ 0.15
CCDC43-204ENST00000588687 TGFAP01135 160 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms