RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	NIPAL2	Q9H841	368 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	OR1A1	Q9P1Q5	309 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	PLLP	Q9Y342	182 aa		4.2	□□□□□ -1.74
TUBD1-208	ENST00000588009	PLEKHH1	Q9ULM0	1364 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	WDR90	Q96KV7	1748 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009		A0A1W2PPV9	198 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	DHRS7C	A6NNS2	312 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	SRRM5	B3KS81	715 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	TCP11X1	B4DZS4	312 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	HSD17B6	O14756	317 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	TBX6	O95947	436 aa	Predicted RBP	4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	LALBA	P00709	142 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	FGF4	P08620	206 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	STS	P08842	583 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	ZNF883	P0CG24	379 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	FOLR2	P14207	255 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	HNRNPH3	P31942	346 aa	Known RBP	4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	SYK	P43405	635 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	PKNOX1	P55347	436 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	LMO4	P61968	165 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	CXCL6	P80162	114 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	CHRNB3	Q05901	458 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	CD47	Q08722	323 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	CARD16	Q5EG05	197 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	C1orf185	Q5T7R7	199 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	METTL11B	Q5VVY1	283 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	RAET1L	Q5VY80	246 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	C2orf66	Q6UXQ4	117 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	C17orf82	Q86X59	251 aa	Predicted RBP	4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	GPR65	Q8IYL9	337 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	POM121L12	Q8N7R1	296 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	CCDC148	Q8NFR7	591 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	AGAP11	Q8TF27	550 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	HAVCR1	Q96D42	359 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	TM4SF19	Q96DZ7	209 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	ZNF641	Q96N77	438 aa	Predicted RBP	4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	CNN2	Q99439	309 aa	Known RBP	4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	MAPKAP1	Q9BPZ7	522 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	EXO5	Q9H790	373 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	MYO3A	Q8NEV4	1616 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	SHPRH	Q149N8	1683 aa		4.19	□□□□□ -1.74
TUBD1-208	ENST00000588009	CACNA1F	O60840	1977 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	IGHV3-35	A0A0C4DH35	117 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	OR2AG2	A6NM03	316 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	DFNA5	O60443	496 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	CTAG2	O75638	210 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	SLITRK3	O94933	977 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	KRT14	P02533	472 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	ANXA8	P13928	327 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	CAPN2	P17655	700 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	TNNI1	P19237	187 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	KITLG	P21583	273 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	VDAC1	P21796	283 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	CALCR	P30988	508 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	DDOST	P39656	456 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	ASPH	Q12797	758 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	PPIL2	Q13356	520 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	OXA1L	Q15070	435 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	FCN2	Q15485	313 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	MICB	Q29980	383 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	TIMM50	Q3ZCQ8	353 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	PAN3	Q58A45	887 aa	Known RBP	4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	ANXA8L1	Q5VT79	327 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	LRRC31	Q6UY01	552 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	NRM	Q8IXM6	262 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	BRSK1	Q8TDC3	778 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	SETD7	Q8WTS6	366 aa	Known RBP	4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	UFD1	Q92890	307 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	SEC22A	Q96IW7	307 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	PANX2	Q96RD6	677 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	KCNA7	Q96RP8	456 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	MTG1	Q9BT17	334 aa	Predicted RBP	4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	RNF126	Q9BV68	326 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	SRXN1	Q9BYN0	137 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	GFRA4	Q9GZZ7	299 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	RBKS	Q9H477	322 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	KIAA1257	Q9ULG3	409 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	TMCO1	Q9UM00	188 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	NPAT	Q14207	1427 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	C9orf84	Q5VXU9	1444 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	TTC41P	Q6P2S7	1318 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	RALGAPB	Q86X10	1494 aa		4.18	□□□□□ -1.74
TUBD1-208	ENST00000588009	HCFC1	P51610	2035 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	IGKV3D-15	A0A087WSY6	115 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	SMIM28	A0A1B0GU29	152 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009		H0YIV9	168 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	CASQ2	O14958	399 aa	Predicted RBP	4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	OXSR1	O95747	527 aa	Predicted RBP	4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	TMEM50A	O95807	157 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	MMP1	P03956	469 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009		P04436	131 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	IGLL1	P15814	213 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	CHML	P26374	656 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	SLC25A1	P53007	311 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	PLK1	P53350	603 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	ARHGAP19	Q14CB8	494 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	EIPR1	Q53HC9	387 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	SPANXN2	Q5MJ10	180 aa		4.17	□□□□□ -1.74
TUBD1-208	ENST00000588009	CXCL17	Q6UXB2	119 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms