RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FAM69AQ5T7M9 428 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 TMEM81Q6P7N7 255 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 SLC16A12Q6ZSM3 486 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 OR52E2Q8NGJ4 325 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 DNAJA3Q96EY1 480 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 KATNB1Q9BVA0 655 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 RYDENQ9NUL5 291 aaKnown RBP17.99■□□□□ 0.47
TRIM47-204ENST00000587339 HPF1Q9NWY4 346 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 MYL12BO14950 172 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 ARPC3O15145 178 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 MT-ATP6P00846 226 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 CD36P16671 472 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 NR4A1P22736 598 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 UQCRC1P31930 480 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 LIPAP38571 399 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 KLHL12Q53G59 568 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 C1orf140Q5VVS0 124 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 C5orf46Q6UWT4 87 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 MEPCEQ7L2J0 689 aaKnown RBP17.98■□□□□ 0.47
TRIM47-204ENST00000587339 MARCH9Q86YJ5 346 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 CYB561A3Q8NBI2 242 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 FAM98AQ8NCA5 519 aaKnown RBP17.98■□□□□ 0.47
TRIM47-204ENST00000587339 PROKR2Q8NFJ6 384 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 OR4K13Q8NH42 304 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 STK35Q8TDR2 534 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 MGLLQ99685 303 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 NPAS1Q99742 590 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 KLHL1Q9NR64 748 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 CHCHD3Q9NX63 227 aaKnown RBP17.98■□□□□ 0.47
TRIM47-204ENST00000587339 MRPS18BQ9Y676 258 aaKnown RBP17.98■□□□□ 0.47
TRIM47-204ENST00000587339 PCNX3Q9H6A9 2034 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 IDH3BO43837 385 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 BGLAPP02818 100 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 PAX7P23759 505 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 DLX5P56178 289 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 ERVK-25P63136 954 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 ARMCX4Q5H9R4 360 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 SHFQ7M4L6 423 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 MAMDC2Q7Z304 686 aaPredicted RBP17.98■□□□□ 0.47
TRIM47-204ENST00000587339 RAB43Q86YS6 212 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 IL22RA1Q8N6P7 574 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 SIRT6Q8N6T7 355 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 NANOGP1Q8N7R0 232 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 SDR9C7Q8NEX9 313 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 PAQR8Q8TEZ7 354 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 SLC25A36Q96CQ1 311 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 FRMD6Q96NE9 622 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 PTDSS2Q9BVG9 487 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 OR11A1Q9GZK7 315 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 NDEL1Q9GZM8 345 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 OR51V1Q9H2C8 321 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 GPN2Q9H9Y4 310 aaPredicted RBP17.98■□□□□ 0.47
TRIM47-204ENST00000587339 KLHL21Q9UJP4 597 aa17.98■□□□□ 0.47
TRIM47-204ENST00000587339 SLC22A31A6NKX4 558 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 GABARAPO95166 117 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 AHSA1O95433 338 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 TGFBR2P37173 567 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 ETV1P50549 477 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 SLC16A1P53985 500 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 SH3BGRP55822 239 aaPredicted RBP17.97■□□□□ 0.47
TRIM47-204ENST00000587339 RPS7P62081 194 aaKnown RBP17.97■□□□□ 0.47
TRIM47-204ENST00000587339 RPL18Q07020 188 aaKnown RBP17.97■□□□□ 0.47
TRIM47-204ENST00000587339 FOXF1Q12946 379 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 C1DQ13901 141 aaKnown RBP17.97■□□□□ 0.47
TRIM47-204ENST00000587339 SPHARQ15513 63 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 SLC22A10Q63ZE4 541 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 H3F3CQ6NXT2 135 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 WDSUB1Q8N9V3 476 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 OR2M3Q8NG83 312 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 OR4F15Q8NGB8 312 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 MRGPRX4Q96LA9 322 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 DCUN1D5Q9BTE7 237 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 PTGES2Q9H7Z7 377 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 FBXL2Q9UKC9 423 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 MPDZO75970 2070 aa17.97■□□□□ 0.47
TRIM47-204ENST00000587339 TRIM64BA6NI03 449 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 ETV2O00321 342 aaPredicted RBP17.96■□□□□ 0.47
TRIM47-204ENST00000587339 OR2T1O43869 369 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 CD14P08571 375 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 TSPAN19P0C672 248 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 CCL3P10147 92 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 LIMK1P53667 647 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 ATP1A4Q13733 1029 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 CTF1Q16619 201 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 PLPPR5Q32ZL2 321 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 PAQR6Q6TCH4 344 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 B3GLCTQ6Y288 498 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 OR4K17Q8NGC6 315 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 NKD1Q969G9 470 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 TEAD3Q99594 435 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 ANGPTL4Q9BY76 406 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 EXOGQ9Y2C4 368 aaKnown RBP17.96■□□□□ 0.47
TRIM47-204ENST00000587339 LSM2Q9Y333 95 aaKnown RBP17.96■□□□□ 0.47
TRIM47-204ENST00000587339 EXOSC1Q9Y3B2 195 aaKnown RBP17.96■□□□□ 0.47
TRIM47-204ENST00000587339 AHCTF1Q8WYP5 2266 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 FREM2Q5SZK8 3169 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 A0A1W2PPW3 197 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 F13BP05160 661 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 CLUP10909 449 aa17.96■□□□□ 0.47
TRIM47-204ENST00000587339 APEHP13798 732 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms