RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 WDR60Q8WVS4 1066 aa13.14□□□□□ -0.31
VAPA-209ENST00000585042 ATP6V1G3Q96LB4 118 aa13.14□□□□□ -0.31
VAPA-209ENST00000585042 PPP1R36Q96LQ0 422 aa13.14□□□□□ -0.31
VAPA-209ENST00000585042 ZNF317Q96PQ6 595 aaPredicted RBP13.14□□□□□ -0.31
VAPA-209ENST00000585042 PANX1Q96RD7 426 aa13.14□□□□□ -0.31
VAPA-209ENST00000585042 KCNK17Q96T54 332 aa13.14□□□□□ -0.31
VAPA-209ENST00000585042 SORT1Q99523 831 aa13.14□□□□□ -0.31
VAPA-209ENST00000585042 MOV10Q9HCE1 1003 aaKnown RBP13.14□□□□□ -0.31
VAPA-209ENST00000585042 FBXO9Q9UK97 447 aaPredicted RBP13.14□□□□□ -0.31
VAPA-209ENST00000585042 A0A1W2PR80 420 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 LIPT2A6NK58 231 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 NDUFS8O00217 210 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 AP3D1O14617 1153 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 KRT75O95678 551 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 PGRP06401 933 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 CHRM4P08173 479 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 CCNA2P20248 432 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 USF1P22415 310 aaPredicted RBP13.13□□□□□ -0.31
VAPA-209ENST00000585042 CXCR1P25024 350 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 SWI5Q1ZZU3 235 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 C3orf36Q3SXR2 165 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 OTUD3Q5T2D3 398 aaPredicted RBP13.13□□□□□ -0.31
VAPA-209ENST00000585042 KLHL24Q6TFL4 600 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 PHC2Q8IXK0 858 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 ANKFN1Q8N957 763 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 C1QTNF6Q9BXI9 259 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 BEX2Q9BXY8 128 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 THAP1Q9NVV9 213 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 TMEM45AQ9NWC5 275 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 CALML5Q9NZT1 146 aa13.13□□□□□ -0.31
VAPA-209ENST00000585042 AQP7P3A6NL99 342 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 HMGB1P1B2RPK0 211 aaPredicted RBP13.12□□□□□ -0.31
VAPA-209ENST00000585042 NR2F1P10589 423 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 HOXB1P14653 301 aaPredicted RBP13.12□□□□□ -0.31
VAPA-209ENST00000585042 GZMKP49863 264 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 WDR4P57081 412 aaKnown RBP13.12□□□□□ -0.31
VAPA-209ENST00000585042 LSM11P83369 360 aaKnown RBP eCLIP13.12□□□□□ -0.31
VAPA-209ENST00000585042 BST1Q10588 318 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 MST1LQ2TV78 715 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 MRPL2Q5T653 305 aaKnown RBP13.12□□□□□ -0.31
VAPA-209ENST00000585042 TMEM225Q6GV28 225 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 ZNF621Q6ZSS3 439 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 AAED1Q7RTV5 226 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 GLB1L3Q8NCI6 653 aaPredicted RBP13.12□□□□□ -0.31
VAPA-209ENST00000585042 OR9K2Q8NGE7 335 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 DNAJA3Q96EY1 480 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 OR52E6Q96RD3 313 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 NUF2Q9BZD4 464 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 MANSC1Q9H8J5 431 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 MYOZ1Q9NP98 299 aaPredicted RBP13.12□□□□□ -0.31
VAPA-209ENST00000585042 AIG1Q9NVV5 245 aa13.12□□□□□ -0.31
VAPA-209ENST00000585042 THUMPD1Q9NXG2 353 aaKnown RBP13.12□□□□□ -0.31
VAPA-209ENST00000585042 A0A096LPI6 279 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 ZC3H12DA2A288 527 aaKnown RBP13.11□□□□□ -0.31
VAPA-209ENST00000585042 CDHR4A6H8M9 788 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 A8MVM7 634 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 VWC2LB2RUY7 222 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 SLCO1B7G3V0H7 640 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 ACAA2P42765 397 aaKnown RBP13.11□□□□□ -0.31
VAPA-209ENST00000585042 PDLIM4P50479 330 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 COPZ1P61923 177 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 UFM1P61960 85 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 CEACAM7Q14002 265 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 C9orf135Q5VTT2 229 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 WBP2NLQ6ICG8 309 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 TMEM99Q8N816 258 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 FAM169BQ8N8A8 192 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 ANKK1Q8NFD2 765 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 MAGEE2Q8TD90 523 aaPredicted RBP13.11□□□□□ -0.31
VAPA-209ENST00000585042 NANOS1Q8WY41 292 aaKnown RBP13.11□□□□□ -0.31
VAPA-209ENST00000585042 TEX37Q96LM6 180 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 ZBTB18Q99592 522 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 KATNB1Q9BVA0 655 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 TAPBPLQ9BX59 468 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 SHARPINQ9H0F6 387 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 ARMC7Q9H6L4 198 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 ZNF232Q9UNY5 417 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 MOKQ9UQ07 419 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 FKBP7Q9Y680 259 aa13.11□□□□□ -0.31
VAPA-209ENST00000585042 TRPC5OSA6NMA1 111 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 PHF1O43189 567 aaPredicted RBP13.1□□□□□ -0.31
VAPA-209ENST00000585042 LMX1BO60663 402 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 KRT33AO76009 404 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 PDE5AO76074 875 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 AKR7A3O95154 331 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 IL6P05231 212 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 TFPTP0C1Z6 253 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 ZCCHC18P0CG32 403 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 IGHV4-31P0DP07 118 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 SLC25A3Q00325 362 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 OR7A5Q15622 319 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 LIN52Q52LA3 116 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 HMGN2P46Q86SG4 172 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 ZNF540Q8NDQ6 660 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 DYDC1Q8WWB3 177 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 AURKBQ96GD4 344 aaPredicted RBP13.1□□□□□ -0.31
VAPA-209ENST00000585042 ZNF385AQ96PM9 386 aaKnown RBP13.1□□□□□ -0.31
VAPA-209ENST00000585042 SLC38A2Q96QD8 506 aa13.1□□□□□ -0.31
VAPA-209ENST00000585042 KCNS3Q9BQ31 491 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms