RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 POLR2DO15514 142 aaKnown RBP2.58□□□□□ -2
PPP4R1-227ENST00000583988 STAMBPO95630 424 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 HOXC4P09017 264 aaPredicted RBP2.58□□□□□ -2
PPP4R1-227ENST00000583988 CRISP2P16562 243 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 ZNF17P17021 662 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 HTR1FP30939 366 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 SHMT2P34897 504 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 PRPHP41219 470 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 CASP4P49662 377 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 CEBPDP49716 269 aaPredicted RBP2.58□□□□□ -2
PPP4R1-227ENST00000583988 OXA1LQ15070 435 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 ATP6AP1Q15904 470 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 ANKDD1AQ495B1 522 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 GPRC6AQ5T6X5 926 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 VSTM4Q8IW00 320 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 CCDC65Q8IXS2 484 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 TMEM123Q8N131 208 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 PNKDQ8N490 385 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 FAM71E2Q8N5Q1 922 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 ARL6IP6Q8N6S5 226 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 OR6C4Q8NGE1 309 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 OR52M1Q8NGK5 317 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 OR6X1Q8NH79 312 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 FAM151AQ8WW52 585 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 SLC41A3Q96GZ6 507 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 CRACR2AQ9BSW2 395 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 GLRX2Q9NS18 164 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 NUFIP1Q9UHK0 495 aaKnown RBP2.58□□□□□ -2
PPP4R1-227ENST00000583988 TMCO1Q9UM00 188 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 CACNG2Q9Y698 323 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 PLEKHH1Q9ULM0 1364 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 A6NIZ1 184 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 E9PBE3 544 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 FAM189A1O60320 539 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 CA11O75493 328 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 P04436 131 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 KLK3P07288 261 aaPredicted RBP2.57□□□□□ -2
PPP4R1-227ENST00000583988 TDGF1P13385 188 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 ICAM2P13598 275 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 NPR2P20594 1047 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 GLRA2P23416 452 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 GNA11P29992 359 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 RBMXP38159 391 aaKnown RBP2.57□□□□□ -2
PPP4R1-227ENST00000583988 DUSP3P51452 185 aaPredicted RBP2.57□□□□□ -2
PPP4R1-227ENST00000583988 TDGF1P3P51864 188 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 RAP1BP61224 184 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 MECOMQ03112 1051 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 GPM6BQ13491 265 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 GRB7Q14451 532 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 NRF1Q16656 503 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 ZNF658BQ4V348 819 aaPredicted RBP2.57□□□□□ -2
PPP4R1-227ENST00000583988 MARCH8Q5T0T0 291 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 OR4F3Q6IEY1 312 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 IGFL2Q6UWQ7 119 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 Q8N9L7 120 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 OR4K14Q8NGD5 310 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 KCNA7Q96RP8 456 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 CLCC1Q96S66 551 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 SDHCQ99643 169 aaPredicted RBP2.57□□□□□ -2
PPP4R1-227ENST00000583988 RIOK2Q9BVS4 552 aaKnown RBP2.57□□□□□ -2
PPP4R1-227ENST00000583988 SLC25A39Q9BZJ4 359 aaPredicted RBP2.57□□□□□ -2
PPP4R1-227ENST00000583988 NXF3Q9H4D5 531 aaKnown RBP2.57□□□□□ -2
PPP4R1-227ENST00000583988 NIPAL2Q9H841 368 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 VCPKMTQ9H867 229 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 MTRF1LQ9UGC7 380 aaKnown RBP2.57□□□□□ -2
PPP4R1-227ENST00000583988 ZNF225Q9UK10 706 aa2.57□□□□□ -2
PPP4R1-227ENST00000583988 IQANK1A0A1B0GTG1 560 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 A8MXQ7 604 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 GPR89AB7ZAQ6 455 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 RAMP3O60896 148 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 ATP5LO75964 103 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 GPR89BP0CG08 455 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 CHTF8P0CG12 524 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 RBMY1CP0DJD4 496 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 CXCR2P25025 360 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 CCR1P32246 355 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 OPRD1P41143 372 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 CCT3P49368 545 aaKnown RBP2.56□□□□□ -2
PPP4R1-227ENST00000583988 PRPS1P60891 318 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 TGFBR3Q03167 851 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 ZNF630Q2M218 657 aaPredicted RBP2.56□□□□□ -2
PPP4R1-227ENST00000583988 KLHL38Q2WGJ6 581 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 FILIP1LQ4L180 1135 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 BOLA3Q53S33 107 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 CARD16Q5EG05 197 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 TMEM255AQ5JRV8 349 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 OR52E8Q6IFG1 317 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 RFLNAQ6ZTI6 216 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 UTS2BQ765I0 119 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 COX15Q7KZN9 410 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 ZNF571Q7Z3V5 609 aaPredicted RBP2.56□□□□□ -2
PPP4R1-227ENST00000583988 LRRC75A-AS1Q8N1F1 130 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 MFSD9Q8NBP5 474 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 FAM83FQ8NEG4 500 aaPredicted RBP2.56□□□□□ -2
PPP4R1-227ENST00000583988 OR10G9Q8NGN4 311 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 MAGEE2Q8TD90 523 aaPredicted RBP2.56□□□□□ -2
PPP4R1-227ENST00000583988 CXorf40BQ96DE9 158 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 TSG101Q99816 390 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 CCT7Q99832 543 aa2.56□□□□□ -2
PPP4R1-227ENST00000583988 TMEM43Q9BTV4 400 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms