RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	CENPH	Q9H3R5	247 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	AIG1	Q9NVV5	245 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	ADPRHL2	Q9NX46	363 aa		13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732		V9GYY5	206 aa	Predicted RBP	13.23	□□□□□ -0.29
SREBF1-222	ENST00000583732	IGHV1-18	A0A0C4DH31	117 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	LIPT2	A6NK58	231 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	LGI1	O95970	557 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	USF1	P22415	310 aa	Predicted RBP	13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	TUBA1B	P68363	451 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	TUBA4A	P68366	448 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	LSM11	P83369	360 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	SRSF2	Q01130	221 aa	Known RBP	13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	STX3	Q13277	289 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	AP1AR	Q63HQ0	302 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	VHLL	Q6RSH7	139 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	TUBA1A	Q71U36	451 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	ANKS4B	Q8N8V4	417 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	ZIC4	Q8N9L1	334 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	PROX1	Q92786	737 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	OR52E6	Q96RD3	313 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	KCNS3	Q9BQ31	491 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	TAPBPL	Q9BX59	468 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	MEAF6	Q9HAF1	191 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	KCNK9	Q9NPC2	374 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	FKBP7	Q9Y680	259 aa		13.22	□□□□□ -0.29
SREBF1-222	ENST00000583732	ARFGEF3	Q5TH69	2177 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	AQP7P3	A6NL99	342 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	FAAH	O00519	579 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	SDHD	O14521	159 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	LMX1B	O60663	402 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	F12	P00748	615 aa	Predicted RBP	13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	PGR	P06401	933 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	IGFBP5	P24593	272 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	SELENOP	P49908	381 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	PDLIM4	P50479	330 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	SNRPD2	P62316	118 aa	Known RBP	13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	BST1	Q10588	318 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	TBRG1	Q3YBR2	411 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	SLC46A3	Q7Z3Q1	461 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	SPATA19	Q7Z5L4	167 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	PEX5L	Q8IYB4	626 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	POMGNT2	Q8NAT1	580 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	OR1K1	Q8NGR3	316 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	ZBTB18	Q99592	522 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	VRK1	Q99986	396 aa	Predicted RBP	13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	PIMREG	Q9BSJ6	248 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	TMEM109	Q9BVC6	243 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	ADAM19	Q9H013	955 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	LPAR3	Q9UBY5	353 aa		13.21	□□□□□ -0.29
SREBF1-222	ENST00000583732	ZNF587B	E7ETH6	402 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	NR5A2	O00482	541 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	TM9SF1	O15321	606 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	FRS3	O43559	492 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	BCHE	P06276	602 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	PRG2	P13727	222 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	ETFA	P13804	333 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	NCF2	P19878	526 aa	Predicted RBP	13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	GZMK	P49863	264 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	UBE2N	P61088	152 aa	Known RBP	13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	MPP2	Q14168	576 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	MAPK11	Q15759	364 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	SWI5	Q1ZZU3	235 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	MST1L	Q2TV78	715 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	KRTAP24-1	Q3LI83	254 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	LIN52	Q52LA3	116 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	TMEM225	Q6GV28	225 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	OGFOD2	Q6N063	350 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	NIPAL3	Q6P499	406 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	LINGO2	Q7L985	606 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	ZNF440	Q8IYI8	595 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	LRRC34	Q8IZ02	419 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	ANKRD42	Q8N9B4	389 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	OR52P1P	Q8NH57	321 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	SLC38A2	Q96QD8	506 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	SF3B5	Q9BWJ5	86 aa	Known RBP	13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	SEC61A2	Q9H9S3	476 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	SLC6A13	Q9NSD5	602 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	TMEM45A	Q9NWC5	275 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	TMEM160	Q9NX00	188 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	P2RX2	Q9UBL9	471 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	HAO1	Q9UJM8	370 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	KCNS2	Q9ULS6	477 aa		13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.2	□□□□□ -0.3
SREBF1-222	ENST00000583732		A0A096LPE4	126 aa		13.19	□□□□□ -0.3
SREBF1-222	ENST00000583732	LOC100289279	A0A1B0GTE1	492 aa		13.19	□□□□□ -0.3
SREBF1-222	ENST00000583732		A0A1W2PPZ6	126 aa		13.19	□□□□□ -0.3
SREBF1-222	ENST00000583732	SLC35F4	A4IF30	521 aa		13.19	□□□□□ -0.3
SREBF1-222	ENST00000583732	CDHR4	A6H8M9	788 aa		13.19	□□□□□ -0.3
SREBF1-222	ENST00000583732		A8MVM7	634 aa		13.19	□□□□□ -0.3
SREBF1-222	ENST00000583732	RFXANK	O14593	260 aa		13.19	□□□□□ -0.3
SREBF1-222	ENST00000583732	SNUPN	O95149	360 aa	Known RBP	13.19	□□□□□ -0.3
SREBF1-222	ENST00000583732	KRT75	O95678	551 aa		13.19	□□□□□ -0.3
SREBF1-222	ENST00000583732	KIT	P10721	976 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms