RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TMEM156Q8N614 296 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 PROKR2Q8NFJ6 384 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 KBTBD8Q8NFY9 601 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 OR52I1Q8NGK6 324 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 SLC25A36Q96CQ1 311 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 ZHX1-C8orf76Q96EF9 292 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 MGLLQ99685 303 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 DOK1Q99704 481 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 ASPNQ9BXN1 380 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 OR51V1Q9H2C8 321 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 PTGES2Q9H7Z7 377 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 CMC2Q9NRP2 79 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 RYDENQ9NUL5 291 aaKnown RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 RALYQ9UKM9 306 aaKnown RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 FARSAQ9Y285 508 aaKnown RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 YARS2Q9Y2Z4 477 aaKnown RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 TMED7Q9Y3B3 224 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 PCDHGB7Q9Y5F8 929 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 IER3IP1Q9Y5U9 82 aa8.46□□□□□ -1.06
SS18-220ENST00000582092 DSPP15924 2871 aaKnown RBP8.46□□□□□ -1.06
SS18-220ENST00000582092 CHD6Q8TD26 2715 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 COL6A6A6NMZ7 2263 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 TRAV36DV7A0A075B6V5 113 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 LOC102723996A0A087X1L8 192 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 IGHV1-45A0A0A0MS14 117 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 LOC100506127A0A0U1RQW1 187 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 DAPL1A0PJW8 107 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 ANKUB1A6NFN9 424 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 OIP5O43482 229 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 OR2T1O43869 369 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 SUSD5O60279 629 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 ATE1O95260 518 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 RENP00797 406 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 MT-ATP6P00846 226 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 IGF2P01344 180 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 RAB40ALP0C0E4 278 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 TFPIP10646 304 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 NR4A1P22736 598 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 PSMA1P25786 263 aaKnown RBP8.45□□□□□ -1.06
SS18-220ENST00000582092 SLC15A1P46059 708 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 SSR4P51571 173 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 EFNA3P52797 238 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 LSM3P62310 102 aaKnown RBP8.45□□□□□ -1.06
SS18-220ENST00000582092 ITGADQ13349 1161 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 IRF3Q14653 427 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 SSPNQ14714 243 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 TSTQ16762 297 aaKnown RBP8.45□□□□□ -1.06
SS18-220ENST00000582092 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.45□□□□□ -1.06
SS18-220ENST00000582092 RNLSQ5VYX0 342 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 FAM198BQ6UWH4 519 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 APOOLQ6UXV4 268 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 USP43Q70EL4 1123 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 GRINAQ7Z429 371 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 VASH2Q86V25 355 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 KLHL36Q8N4N3 616 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 NANOGP1Q8N7R0 232 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 OR4K17Q8NGC6 315 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 OR52E2Q8NGJ4 325 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 GPR119Q8TDV5 335 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 ST8SIA1Q92185 356 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 DDIT4LQ96D03 193 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 LGALS12Q96DT0 336 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 YIPF6Q96EC8 236 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 ZNF426Q9BUY5 554 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 TAPBPLQ9BX59 468 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 NAA50Q9GZZ1 169 aaKnown RBP8.45□□□□□ -1.06
SS18-220ENST00000582092 ADAM19Q9H013 955 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 AKIRIN1Q9H9L7 192 aaPredicted RBP8.45□□□□□ -1.06
SS18-220ENST00000582092 FGF20Q9NP95 211 aaPredicted RBP8.45□□□□□ -1.06
SS18-220ENST00000582092 EXOSC4Q9NPD3 245 aaKnown RBP8.45□□□□□ -1.06
SS18-220ENST00000582092 GRHPRQ9UBQ7 328 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 SSR3Q9UNL2 185 aa8.45□□□□□ -1.06
SS18-220ENST00000582092 SPIN1Q9Y657 262 aaPredicted RBP8.45□□□□□ -1.06
SS18-220ENST00000582092 A0A1W2PPW3 197 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 A8MVM7 634 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 BHLHE40O14503 412 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 XKRYO14609 159 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 ADAM11O75078 769 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 TRIM3O75382 744 aaPredicted RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 SERPINI2O75830 405 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 PTHP01270 115 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 FBXO45P0C2W1 286 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 LIFP15018 202 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 SOX6P35712 828 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 APOBEC1P41238 236 aaKnown RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 RPS5P46782 204 aaKnown RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 RGS6P49758 472 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 WNT4P56705 351 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 CTXN1P60606 82 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 TUBA1BP68363 451 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 EFNB1P98172 346 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 NFATC3Q12968 1075 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 MFSD13AQ14CX5 517 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 PCOLCEQ15113 449 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 PON3Q15166 354 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 ZNF74Q16587 644 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 CRTC2Q53ET0 693 aaPredicted RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 ALG10Q5BKT4 473 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 FCRLBQ6BAA4 426 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 DESI1Q6ICB0 168 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms