RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ICAM5Q9UMF0 924 aa12.19□□□□□ -0.46
CSNK1D-220ENST00000581737 HEATR5AQ86XA9 2040 aa12.19□□□□□ -0.46
CSNK1D-220ENST00000581737 SH3PXD2BA1X283 911 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 DPPA5A6NC42 116 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 C17orf51A8MQB3 221 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 GMFGO60234 142 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 NOL3O60936 208 aaKnown RBP12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 ACTL6AO96019 429 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 SMIM18P0DKX4 95 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 OSMP13725 252 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 ATP6V1B1P15313 513 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 ABOP16442 354 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 CHMP24386 653 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 PTGS2P35354 604 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 GGT2P36268 569 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 CASP6P55212 293 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 LAPTM4AQ15012 233 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 NDUFAF6Q330K2 333 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 WIPI1Q5MNZ9 446 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 C6orf141Q5SZD1 244 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 ZNF773Q6PK81 442 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 CBLN3Q6UW01 205 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 ZNF730Q6ZMV8 503 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 TSEN54Q7Z6J9 526 aaKnown RBP12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 YRDCQ86U90 279 aaKnown RBP12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 SVOPQ8N4V2 548 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 OR6T1Q8NGN1 323 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 GNPDA2Q8TDQ7 276 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 IPCEF1Q8WWN9 437 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 ACOT11Q8WXI4 607 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 TMEM234Q8WY98 164 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 ST8SIA1Q92185 356 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 CNOT9Q92600 299 aaKnown RBP12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 TRIM2Q9C040 744 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 TMEM27Q9HBJ8 222 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 MED17Q9NVC6 651 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 DNAJB12Q9NXW2 375 aaKnown RBP12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 RPS6KB2Q9UBS0 482 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 A4GNTQ9UNA3 340 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 TMEM5Q9Y2B1 443 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 LIPGQ9Y5X9 500 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 PCNX3Q9H6A9 2034 aa12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 SETD2Q9BYW2 2564 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-220ENST00000581737 F8P00451 2351 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 A0A1B0GTH9 108 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 TRAPPC13A5PLN9 417 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 TRIM64A6NGJ6 449 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 CLDN24A6NM45 220 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 B4DXG7 233 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 PRRG2O14669 202 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 OIP5O43482 229 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 ZIC3O60481 467 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 MITFO75030 526 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 LINGO3P0C6S8 592 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 PLPPR5Q32ZL2 321 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 ZNF613Q6PF04 617 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 CASP12Q6UXS9 341 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 CD300LDQ6UXZ3 194 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 CDK20Q8IZL9 346 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 GTPBP8Q8N3Z3 284 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 OR9Q2Q8NGE9 314 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 FAM81AQ8TBF8 368 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 GPR119Q8TDV5 335 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 MRGPRX4Q96LA9 322 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 HS6ST2Q96MM7 605 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 Q96MT0 163 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 RHCGQ9UBD6 479 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 VDAC3Q9Y277 283 aa12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 RPH3AQ9Y2J0 694 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-220ENST00000581737 TRBV4-1A0A0J9YWV2 114 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 HTR3EA5X5Y0 456 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 CPSF4LA6NMK7 179 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 SNTNA6NMZ2 147 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 SLC19A2O60779 497 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 FAM20BO75063 409 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 CLIC3O95833 236 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 ELK4P28324 431 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 ADH6P28332 368 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 CRISP1P54107 249 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 ISL1P61371 349 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 COPZ1P61923 177 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 HSF1Q00613 529 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 MVKQ03426 396 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 CD47Q08722 323 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 PIN1Q13526 163 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 MAD2L1BPQ15013 274 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 QPRTQ15274 297 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 SF3B4Q15427 424 aaKnown RBP eCLIP12.16□□□□□ -0.461e-8■■■■■ 27.6
CSNK1D-220ENST00000581737 ENTPD8Q5MY95 495 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 RPL13AP3Q6NVV1 102 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 ARSKQ6UWY0 536 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 GPR141Q7Z602 305 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 FJX1Q86VR8 437 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 PM20D2Q8IYS1 436 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 RNF113BQ8IZP6 322 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 OR4K5Q8NGD3 323 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 ZNF563Q8TA94 476 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 FAM57AQ8TBR7 257 aa12.16□□□□□ -0.46
CSNK1D-220ENST00000581737 TEX47Q8TBZ9 253 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms