RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TRIM64BA6NI03 449 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 OR5H1A6NKK0 313 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 B2RBV5 119 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 CLOCKO15516 846 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 EIF1BO60739 113 aaKnown RBP18.46■□□□□ 0.55
CCDC42-203ENST00000581598 UQCRBP14927 111 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 IL7RP16871 459 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 ATP5J2P56134 94 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 BSPH1Q075Z2 132 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 EPS8Q12929 822 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 MAPK11Q15759 364 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 GTDC1Q4AE62 458 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 MRPL2Q5T653 305 aaKnown RBP18.46■□□□□ 0.55
CCDC42-203ENST00000581598 Q71RC1 249 aaPredicted RBP18.46■□□□□ 0.55
CCDC42-203ENST00000581598 PEX5LQ8IYB4 626 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 RBM15BQ8NDT2 890 aaKnown RBP18.46■□□□□ 0.55
CCDC42-203ENST00000581598 APH1AQ96BI3 265 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 DDIT4LQ96D03 193 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 CGREF1Q99674 301 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 C1orf21Q9H246 121 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 VAPAQ9P0L0 249 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 P2RX2Q9UBL9 471 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 MALT1Q9UDY8 824 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 PCDHB14Q9Y5E9 798 aa18.46■□□□□ 0.55
CCDC42-203ENST00000581598 CFAP73A6NFT4 308 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 TACR3P29371 465 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 SLC35A1P78382 337 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 STK11Q15831 433 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 ETFDHQ16134 617 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 ZSWIM7Q19AV6 140 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 RINLQ6ZS11 566 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.45■□□□□ 0.54
CCDC42-203ENST00000581598 ATG4DQ86TL0 474 aaPredicted RBP18.45■□□□□ 0.54
CCDC42-203ENST00000581598 PNPT1Q8TCS8 783 aaKnown RBP18.45■□□□□ 0.54
CCDC42-203ENST00000581598 SMAP2Q8WU79 429 aaPredicted RBP18.45■□□□□ 0.54
CCDC42-203ENST00000581598 TRIM2Q9C040 744 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 GRIP2Q9C0E4 1043 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 ADAM19Q9H013 955 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 THUMPD1Q9NXG2 353 aaKnown RBP18.45■□□□□ 0.54
CCDC42-203ENST00000581598 NDE1Q9NXR1 346 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 TAS2R1Q9NYW7 299 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 TLN2Q9Y4G6 2542 aa18.45■□□□□ 0.54
CCDC42-203ENST00000581598 CSPG4Q6UVK1 2322 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 TMEM72A0PK05 275 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 CDHR4A6H8M9 788 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 MRPL33O75394 65 aaKnown RBP18.44■□□□□ 0.54
CCDC42-203ENST00000581598 THBS1P07996 1170 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 SOD3P08294 240 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 IMPDH2P12268 514 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 NTF4P34130 210 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 OR2B6P58173 313 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 NCALDP61601 193 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 RUNDC3AQ59EK9 446 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 CCDC103Q8IW40 242 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 PGAM4Q8N0Y7 254 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 KBTBD8Q8NFY9 601 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 NEUROG1Q92886 237 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 TRMT61AQ96FX7 289 aaKnown RBP18.44■□□□□ 0.54
CCDC42-203ENST00000581598 ANKRD27Q96NW4 1050 aa18.44■□□□□ 0.54
CCDC42-203ENST00000581598 HOPXQ9BPY8 73 aaPredicted RBP18.44■□□□□ 0.54
CCDC42-203ENST00000581598 CPPED1Q9BRF8 314 aaPredicted RBP18.44■□□□□ 0.54
CCDC42-203ENST00000581598 NAA11Q9BSU3 229 aaPredicted RBP18.44■□□□□ 0.54
CCDC42-203ENST00000581598 PLCE1Q9P212 2302 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 RAMP1O60894 148 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 ANP32DO95626 131 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 CCNA2P20248 432 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 CRISP3P54108 245 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 SLC25A3Q00325 362 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 LIN52Q52LA3 116 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 C1QTNF12Q5T7M4 302 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 RNF220Q5VTB9 566 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 PAQR6Q6TCH4 344 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 C16orf89Q6UX73 402 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 ARPINQ7Z6K5 226 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 OR8J3Q8NGG0 315 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 OR52P1PQ8NH57 321 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 RADILQ96JH8 1075 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 TPT1P8Q9HAU6 139 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 ASB6Q9NWX5 421 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 TAS2R16Q9NYV7 291 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 NPAP1Q9NZP6 1156 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 SLC9A8Q9Y2E8 581 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 FLVCR1Q9Y5Y0 555 aa18.43■□□□□ 0.54
CCDC42-203ENST00000581598 HIVEP2P31629 2446 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 SHISA9B4DS77 424 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 PDLIM1O00151 329 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 SMAD7O15105 426 aaKnown RBP18.42■□□□□ 0.54
CCDC42-203ENST00000581598 TFPTP0C1Z6 253 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 ETFAP13804 333 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 SLC6A2P23975 617 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 RASSF2P50749 326 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 DSTNP60981 165 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 PSME3P61289 254 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 MXRA7P84157 204 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 SLC17A1Q14916 467 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 PGGHGQ32M88 737 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 NANOGP8Q6NSW7 305 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 DTX2Q86UW9 622 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 UBE2J2Q8N2K1 259 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 SLC38A5Q8WUX1 472 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 255.5 ms