RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 COX5AP20674 150 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 APOBEC3AP31941 199 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 RPL3P39023 403 aaKnown RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 APOBEC1P41238 236 aaKnown RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 MAGEA8P43361 318 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 SUMO3P55854 103 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 TUBA1BP68363 451 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TUBA4AP68366 448 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 CSNK2A1P68400 391 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 KCNJ10P78508 379 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 LSM11P83369 360 aaKnown RBP eCLIP3.36□□□□□ -1.874e-7■□□□□ 8.2
NUP85-209ENST00000578987 GUCY1A3Q02108 690 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 PLAURQ03405 335 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 LOXL1Q08397 574 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 FUT5Q11128 374 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 CEACAM7Q14002 265 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ETFDHQ16134 617 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 PDCD2Q16342 344 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 SYPL1Q16563 259 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 NRF1Q16656 503 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 HIKESHIQ53FT3 197 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 RPS26P11Q5JNZ5 115 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 FAM209AQ5JX71 171 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TYW3Q6IPR3 259 aaKnown RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 OGFOD2Q6N063 350 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 VHLLQ6RSH7 139 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 KLHL17Q6TDP4 642 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 EPGNQ6UW88 154 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TMEM108Q6UXF1 575 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 CASP12Q6UXS9 341 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 FRRS1Q6ZNA5 592 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TUBA1AQ71U36 451 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 EIF3MQ7L2H7 374 aaKnown RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 SPATA19Q7Z5L4 167 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 P2RY8Q86VZ1 359 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ZCCHC24Q8N2G6 241 aaKnown RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 KDM8Q8N371 416 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 NATD1Q8N6N6 113 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TMEM99Q8N816 258 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ANKS4BQ8N8V4 417 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ANKFN1Q8N957 763 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 VPS37AQ8NEZ2 397 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ANKK1Q8NFD2 765 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 PSMA8Q8TAA3 256 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 PNPT1Q8TCS8 783 aaKnown RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 SFXN5Q8TD22 340 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 C10orf105Q8TEF2 133 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TMEM234Q8WY98 164 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ST8SIA1Q92185 356 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 APH1AQ96BI3 265 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ROPN1LQ96C74 230 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ZNF764Q96H86 408 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 C1orf159Q96HA4 380 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TEX37Q96LM6 180 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 SORCS2Q96PQ0 1159 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ZNF317Q96PQ6 595 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 PRPF18Q99633 342 aaKnown RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 VRK1Q99986 396 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 INPP5KQ9BT40 448 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 SOX7Q9BT81 388 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 CCDC28BQ9BUN5 200 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 NUF2Q9BZD4 464 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 DPY30Q9C005 99 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 BHLHE41Q9C0J9 482 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 SHARPINQ9H0F6 387 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 AKTIPQ9H8T0 292 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 BARX1Q9HBU1 254 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 GP6Q9HCN6 339 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 HHATLQ9HCP6 504 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 SLCO1B3Q9NPD5 702 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 SLC17A5Q9NRA2 495 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.36□□□□□ -1.87
NUP85-209ENST00000578987 MRGBPQ9NV56 204 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 ATAD3AQ9NVI7 634 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 FAIMQ9NVQ4 179 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 RLIMQ9NVW2 624 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TAS2R16Q9NYV7 291 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TMEM181Q9P2C4 612 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 OSGIN1Q9UJX0 560 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 PCDHGB4Q9UN71 923 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 MGAT4BQ9UQ53 548 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 TMED7Q9Y3B3 224 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 WDR45Q9Y484 360 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 PCDHB14Q9Y5E9 798 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 FLVCR1Q9Y5Y0 555 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 USH1CQ9Y6N9 552 aa3.36□□□□□ -1.87
NUP85-209ENST00000578987 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.36□□□□□ -1.872e-16■■■■■ 61.2
NUP85-209ENST00000578987 IGKV3D-15A0A087WSY6 115 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 A0A096LPE4 126 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 TRAV20A0A0B4J274 112 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 IGHV1-18A0A0C4DH31 117 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GOLGA8QA0A0J9YX86 632 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 LOC100289279A0A1B0GTE1 492 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 A0A1W2PPZ6 126 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GOLGA8OA6NCC3 632 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 ELOA3DA6NLF2 546 aaPredicted RBP3.35□□□□□ -1.87
NUP85-209ENST00000578987 ATP6V1G2-DDX39BF2Z307 99 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 GOLGA8NF8WBI6 632 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 LYNX1G3V0Z9 82 aa3.35□□□□□ -1.87
NUP85-209ENST00000578987 PDLIM1O00151 329 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms