RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TRIM2Q9C040 744 aa11.36□□□□□ -0.59
CCDC57-211ENST00000578187 KLHL4Q9C0H6 718 aa11.36□□□□□ -0.59
CCDC57-211ENST00000578187 UBTD1Q9HAC8 227 aa11.36□□□□□ -0.59
CCDC57-211ENST00000578187 BCO1Q9HAY6 547 aa11.36□□□□□ -0.59
CCDC57-211ENST00000578187 TMEM181Q9P2C4 612 aa11.36□□□□□ -0.59
CCDC57-211ENST00000578187 ABCD2Q9UBJ2 740 aa11.36□□□□□ -0.59
CCDC57-211ENST00000578187 ING1Q9UK53 422 aaPredicted RBP11.36□□□□□ -0.59
CCDC57-211ENST00000578187 SLC13A4Q9UKG4 626 aa11.36□□□□□ -0.59
CCDC57-211ENST00000578187 CLEC4AQ9UMR7 237 aa11.36□□□□□ -0.59
CCDC57-211ENST00000578187 TRAPPC4Q9Y296 219 aa11.36□□□□□ -0.59
CCDC57-211ENST00000578187 A0A1B0GWA3 101 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 M0R3H8 397 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 TPST2O60704 377 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 FMO6PO60774 539 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 NPIPB7O75200 414 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 IMPDH2P12268 514 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 HOXC12P31275 282 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 SLC7A2P52569 658 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 NCALDP61601 193 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 GKAP1Q5VSY0 366 aaPredicted RBP11.35□□□□□ -0.59
CCDC57-211ENST00000578187 RANBP3LQ86VV4 465 aaPredicted RBP11.35□□□□□ -0.59
CCDC57-211ENST00000578187 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 ZNF610Q8N9Z0 462 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 WFDC11Q8NEX6 87 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 OR52E4Q8NGH9 312 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 DNAJA4Q8WW22 397 aaPredicted RBP11.35□□□□□ -0.59
CCDC57-211ENST00000578187 ZHX1-C8orf76Q96EF9 292 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 ZC3HAV1LQ96H79 300 aaKnown RBP11.35□□□□□ -0.59
CCDC57-211ENST00000578187 POM121Q96HA1 1249 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 TACO1Q9BSH4 297 aaKnown RBP11.35□□□□□ -0.59
CCDC57-211ENST00000578187 DLL4Q9NR61 685 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 KLHL9Q9P2J3 617 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 C2CD3Q4AC94 2353 aa11.35□□□□□ -0.59
CCDC57-211ENST00000578187 FREM1Q5H8C1 2179 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 A0A0B4J2E0 115 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 A0A1B0GX12 115 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 ELOVL7A1L3X0 281 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 A8MVM7 634 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 ZNF814B7Z6K7 855 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 NDUFAB1O14561 156 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 FZD7O75084 574 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 PRKD3O94806 890 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 IDUAP35475 653 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 SLC35A1P78382 337 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 H3F3AP84243 136 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 LIPEQ05469 1076 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 BNIP2Q12982 314 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 PDK3Q15120 406 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 NPTX1Q15818 432 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 ACKR1Q16570 336 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 ALG10BQ5I7T1 473 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
CCDC57-211ENST00000578187 ULK3Q6PHR2 472 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 BEND4Q6ZU67 534 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 TUSC5Q8IXB3 177 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 OR4D11Q8NGI4 311 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 OR6T1Q8NGN1 323 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 STK35Q8TDR2 534 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 SLC26A7Q8TE54 656 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 DNAJA3Q96EY1 480 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 PRR14Q9BWN1 585 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 PCDHAC1Q9H158 963 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 ALG2Q9H553 416 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 PLSCR4Q9NRQ2 329 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 GMPR2Q9P2T1 348 aaKnown RBP11.34□□□□□ -0.59
CCDC57-211ENST00000578187 RPS6KB2Q9UBS0 482 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 TAGLN3Q9UI15 199 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 ADAM21Q9UKJ8 722 aa11.34□□□□□ -0.59
CCDC57-211ENST00000578187 HRNRQ86YZ3 2850 aaPredicted RBP11.34□□□□□ -0.59
CCDC57-211ENST00000578187 ITPR3Q14573 2671 aa11.33□□□□□ -0.59
CCDC57-211ENST00000578187 IGKV3D-15A0A087WSY6 115 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 LIPT2A6NK58 231 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 ELOA3DA6NLF2 546 aaPredicted RBP11.33□□□□□ -0.6
CCDC57-211ENST00000578187 ZNF716A6NP11 495 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 ZNF724A8MTY0 619 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 DEFB108AA8MXU0 73 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 YES1P07947 543 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 INHBBP09529 407 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 PNMTP11086 282 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 KDELR2P33947 212 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 GSK3BP49841 420 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 SLC16A1P53985 500 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 NR1H2P55055 460 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 OR2B6P58173 313 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 PSME3P61289 254 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 EGR4Q05215 589 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 RASGEF1BQ0VAM2 473 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 OR1Q1Q15612 314 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 ELOA3BQ3SY89 546 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 LRRC23Q53EV4 343 aaPredicted RBP11.33□□□□□ -0.6
CCDC57-211ENST00000578187 BEX5Q5H9J7 111 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 Q5PR19 223 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 TMEM201Q5SNT2 666 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 C1orf140Q5VVS0 124 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 ZNF613Q6PF04 617 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 PAQR6Q6TCH4 344 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 C5orf46Q6UWT4 87 aa11.33□□□□□ -0.6
CCDC57-211ENST00000578187 FITM2Q8N6M3 262 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms