RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 SLC35A3Q9Y2D2 325 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 SPTBN5Q9NRC6 3674 aaKnown RBP12.57□□□□□ -0.4
NDEL1-204ENST00000578172 L7N2F9 121 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 ERVH48-1M5A8F1 160 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 HIST1H2ABP04908 130 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 LINC00271P0C7V0 271 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 NDUFS1P28331 727 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 ARHGDIBP52566 201 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 ZNF658BQ4V348 819 aaPredicted RBP12.57□□□□□ -0.4
NDEL1-204ENST00000578172 SIGIRRQ6IA17 410 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 HIST3H2AQ7L7L0 130 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 SPERTQ8NA61 448 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 SFXN5Q8TD22 340 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 HIST1H2ACQ93077 130 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 MED30Q96HR3 178 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 Q9N2J8 555 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 PRTFDC1Q9NRG1 225 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 ATP6V1G2-DDX39BF2Z307 99 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 H3BUI4 141 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 TCRBP04435 133 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 ALDOBP05062 364 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 CCDC157Q569K6 752 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 HBMQ6B0K9 141 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 NDUFAF7Q7L592 441 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 MOAP1Q96BY2 351 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 SGTBQ96EQ0 304 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 MAP3K3Q99759 626 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 ARHGDIGQ99819 225 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 PDCD10Q9BUL8 212 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 GTPBP2Q9BX10 602 aaKnown RBP12.57□□□□□ -0.4
NDEL1-204ENST00000578172 CENPMQ9NSP4 180 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 EVA1BQ9NVM1 165 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 ACAD8Q9UKU7 415 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 MKL2Q9ULH7 1088 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 HEBP2Q9Y5Z4 205 aa12.57□□□□□ -0.4
NDEL1-204ENST00000578172 MTCL1Q9Y4B5 1905 aaKnown RBP12.57□□□□□ -0.4
NDEL1-204ENST00000578172 RPS5P46782 204 aaKnown RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 ZNF136P52737 540 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 TRA2BP62995 288 aaKnown RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 TMEM69Q5SWH9 247 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 DPY19L4Q7Z388 723 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 PAQR7Q86WK9 346 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 DNAJA4Q8WW22 397 aaPredicted RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 NSMAFQ92636 917 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 CNN2Q99439 309 aaKnown RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 FLRT3Q9NZU0 649 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 MGAT4CQ9UBM8 478 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 FBXL3Q9UKT7 428 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 FARSAQ9Y285 508 aaKnown RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 ZNF780AO75290 641 aaPredicted RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 ANXA7P20073 488 aaKnown RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 NPR2P20594 1047 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 GDNFP39905 211 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 GZMKP49863 264 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 ALG11Q2TAA5 492 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 EOGTQ5NDL2 527 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 ZNF627Q7L945 461 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 LMX1AQ8TE12 382 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 OR2A5Q96R48 311 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 TAS2R10Q9NYW0 307 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 NUP50Q9UKX7 468 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 COL4A4P53420 1690 aaPredicted RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 CELSR3Q9NYQ7 3312 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 C2orf74A8MZ97 194 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 SYT5O00445 386 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 SLC19A2O60779 497 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 PDGFAP04085 211 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 ZNF806P0C7X5 589 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 THEGLP0DJG4 465 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 ANXA3P12429 323 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 POU3F3P20264 500 aaPredicted RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 HLA-DQA1Q5Y7H0 255 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 MRM1Q6IN84 353 aaKnown RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 APOOLQ6UXV4 268 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 RCBTB1Q8NDN9 531 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 OR52B4Q8NGK2 314 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 ZNRF4Q8WWF5 429 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 GIMAP5Q96F15 307 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 RNF170Q96K19 258 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 PPP1R3EQ9H7J1 279 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 TRAPPC4Q9Y296 219 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 SPARCP09486 303 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 SHHQ15465 462 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 ZIC1Q15915 447 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 LRRC28Q86X40 367 aaPredicted RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 HCAR2Q8TDS4 363 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 PPP1R14AQ96A00 147 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 AHCYL2Q96HN2 611 aaKnown RBP12.56□□□□□ -0.4
NDEL1-204ENST00000578172 HYLS1Q96M11 299 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 SIGLEC7Q9Y286 467 aa12.56□□□□□ -0.4
NDEL1-204ENST00000578172 HEATR5AQ86XA9 2040 aa12.55□□□□□ -0.4
NDEL1-204ENST00000578172 WNT1P04628 370 aa12.55□□□□□ -0.4
NDEL1-204ENST00000578172 AKT2P31751 481 aa12.55□□□□□ -0.4
NDEL1-204ENST00000578172 MLLT3P42568 568 aaPredicted RBP12.55□□□□□ -0.4
NDEL1-204ENST00000578172 TEKQ02763 1124 aa12.55□□□□□ -0.4
NDEL1-204ENST00000578172 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
NDEL1-204ENST00000578172 STK11Q15831 433 aa12.55□□□□□ -0.4
NDEL1-204ENST00000578172 DEFB133Q30KQ1 61 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms