RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 MAGEA12P43365 314 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 MAD2L1BPQ15013 274 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 MSMPQ1L6U9 139 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 ARMCX4Q5H9R4 360 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 SAXO2Q658L1 398 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 BRICD5Q6PL45 260 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 GRINAQ7Z429 371 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 ADGRG3Q86Y34 549 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 TMEM151AQ8N4L1 468 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 ERP44Q9BS26 406 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 NMUR2Q9GZQ4 415 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 SIRT3Q9NTG7 399 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 ZNF69Q9UC07 566 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 MMP24Q9Y5R2 645 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 CLDN34H7C241 214 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 TIMM23O14925 209 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 TBX19O60806 448 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 SEC22BO75396 215 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 RSL1D1O76021 490 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 URI1O94763 535 aaPredicted RBP12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 IGHV2-5P01817 119 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 KRT16P08779 473 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 IMPDH2P12268 514 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 TAC1P20366 129 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 NR4A1P22736 598 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 RYKP34925 604 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 ARR3P36575 388 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 PLTPP55058 493 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 FOXA1P55317 472 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 TP53BP2Q13625 1128 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 SLC9A3R2Q15599 337 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 GPR68Q15743 365 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 ATP6AP1LQ52LC2 224 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 PAQR6Q6TCH4 344 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 SPATC1Q76KD6 591 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 EIF3MQ7L2H7 374 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 GPAT4Q86UL3 456 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 CREG2Q8IUH2 290 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 IL17RDQ8NFM7 739 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 DDIT4LQ96D03 193 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 ZNF48Q96MX3 618 aaPredicted RBP12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 NELFAQ9H3P2 528 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 KCNE5Q9UJ90 142 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 MID2Q9UJV3 735 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 NUP50Q9UKX7 468 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 PCDHGB4Q9UN71 923 aa12.06□□□□□ -0.48
PPP4R1-206ENST00000577779 CENPVL1A0A0U1RR11 272 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 NPIPB8E9PQR5 432 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 SCAMP2O15127 329 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 PIN1P1O15428 100 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 CDC14BO60729 498 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 NAT2P11245 290 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 IMPDH1P20839 514 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 SELENOPP49908 381 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 SH3BGRP55822 239 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 ZNF141Q15928 474 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 RHOUQ7L0Q8 258 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 LINGO2Q7L985 606 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 LSRQ86X29 649 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 BCL6BQ8N143 479 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 KIR3DL3Q8N743 410 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 OR56A1Q8NGH5 318 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 CLHC1Q8NHS4 586 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 RAB8BQ92930 207 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 SDF2Q99470 211 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 CITED1Q99966 193 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 SF3B5Q9BWJ5 86 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 ZNF385DQ9H6B1 395 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 MID1IP1Q9NPA3 183 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 RRAGDQ9NQL2 400 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 PLEK2Q9NYT0 353 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 TESQ9UGI8 421 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 NOX1Q9Y5S8 564 aa12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 NUP214P35658 2090 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-206ENST00000577779 TMED7-TICAM2A0A0A6YYA0 188 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 A0A1B0GUS0 222 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 BCKDHAP12694 445 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 RAD52P43351 418 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 CCT3P49368 545 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 LCN2P80188 198 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 PDE7AQ13946 482 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 SPDYE7PQ495Y7 208 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 MDP1Q86V88 176 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 RETREG3Q86VR2 466 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 LRP11Q86VZ4 500 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 WDFY1Q8IWB7 410 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 LRRC8AQ8IWT6 810 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 TMEM99Q8N816 258 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 PMM1Q92871 262 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 POP5Q969H6 163 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 TSSK3Q96PN8 268 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 OR7D2Q96RA2 312 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 CCT7Q99832 543 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 RBM4BQ9BQ04 359 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 SERHL2Q9H4I8 314 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 PIF1Q9H611 641 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 BEX1Q9HBH7 125 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 GPATCH2Q9NW75 528 aa12.04□□□□□ -0.48
PPP4R1-206ENST00000577779 MYEF2Q9P2K5 600 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms