RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TACR3P29371 465 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 IL2RGP31785 369 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 SERPINB5P36952 375 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 DVL1P1P54792 670 aaPredicted RBP10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 SH3BGRP55822 239 aaPredicted RBP10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 CLDN8P56748 225 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 ACTG1P63261 375 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 GNA13Q14344 377 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 TMEM225Q6GV28 225 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 OR4F3Q6IEY1 312 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 TNFAIP8L2Q6P589 184 aaPredicted RBP10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 ANKRD16Q6P6B7 361 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 ZNF786Q8N393 782 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 ZIC4Q8N9L1 334 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 VPS37AQ8NEZ2 397 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 NUP37Q8NFH4 326 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 OR8J2Q8NGG1 315 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 CNOT9Q92600 299 aaKnown RBP10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 RAB8BQ92930 207 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 ANKRD27Q96NW4 1050 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 ZNF385AQ96PM9 386 aaKnown RBP10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 ALKBH3Q96Q83 286 aaPredicted RBP10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 ZNF442Q9H7R0 627 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 DYNLRB1Q9NP97 96 aa10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 NOP53Q9NZM5 478 aaKnown RBP10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 CRNNQ9UBG3 495 aaPredicted RBP10.11□□□□□ -0.79
CTDNEP1-212ENST00000576613 ZC3H12DA2A288 527 aaKnown RBP10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 AQP7P3A6NL99 342 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 CLDN24A6NM45 220 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 B4DSR2 109 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 FAAHO00519 579 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 AKR7A3O95154 331 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 VAMP5O95183 116 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 LGI1O95970 557 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 IGLV1-44P01699 117 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 SHBGP04278 402 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 NPR2P20594 1047 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 UQCRC2P22695 453 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 CXCR1P25024 350 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 ALDH3A1P30838 453 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 CHI3L1P36222 383 aaPredicted RBP10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 PLAURQ03405 335 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 FUT5Q11128 374 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 CEACAM7Q14002 265 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 OR7A5Q15622 319 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 ANXA8L1Q5VT79 327 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 SPATA21Q7Z572 469 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 HMGN2P46Q86SG4 172 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 GLCCI1Q86VQ1 547 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 SVOPLQ8N434 492 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 TMEM99Q8N816 258 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 FAM169BQ8N8A8 192 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 MAGEE2Q8TD90 523 aaPredicted RBP10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 UBASH3BQ8TF42 649 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 UBLCP1Q8WVY7 318 aaPredicted RBP10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 ZG16BQ96DA0 208 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 APOPT1Q96IL0 206 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 TAPBPLQ9BX59 468 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 MKS1Q9NXB0 559 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 ASIC5Q9NY37 505 aa10.1□□□□□ -0.79
CTDNEP1-212ENST00000576613 PRSS51A0A1B0GVH4 220 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 CFAP73A6NFT4 308 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 LIPT2A6NK58 231 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 SCN2BO60939 215 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 IGKV3-15P01624 115 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 CALCRP30988 508 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 THBS4P35443 961 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 ANXA11P50995 505 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 EMX2Q04743 252 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 RIN1Q13671 783 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 CCNIQ14094 377 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 ADRM1Q16186 407 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 GSTA3Q16772 222 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 SMU1Q2TAY7 513 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 SAXO2Q658L1 398 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 SHQ1Q6PI26 577 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 ANKRD46Q86W74 232 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 ZNF440Q8IYI8 595 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 C3orf56Q8N813 242 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 SGMS2Q8NHU3 365 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 EPS8L3Q8TE67 593 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 ZNF418Q8TF45 676 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 BCL2L2Q92843 193 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 NEURL3Q96EH8 262 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 TRNT1Q96Q11 434 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 DOK1Q99704 481 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 MECRQ9BV79 373 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 METTL17Q9H7H0 456 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 ADPRHL2Q9NX46 363 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 MARCOQ9UEW3 520 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 PRDM4Q9UKN5 801 aa10.09□□□□□ -0.79
CTDNEP1-212ENST00000576613 DYSFO75923 2080 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 A0A096LPE4 126 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 A0A1W2PPZ6 126 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 SH3PXD2BA1X283 911 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 AGAP5A6NIR3 686 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 NR5A2O00482 541 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 VENTXO95231 258 aa10.08□□□□□ -0.8
CTDNEP1-212ENST00000576613 CPSF4O95639 269 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms