RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 GABRA6Q16445 453 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 TIMM23BQ5SRD1 257 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 GCNT6Q5T4J0 391 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 C1orf140Q5VVS0 124 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 PAQR6Q6TCH4 344 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 CLEC9AQ6UXN8 241 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 DLEU7Q6UYE1 221 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 B3GLCTQ6Y288 498 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 LINGO2Q7L985 606 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 RETREG3Q86VR2 466 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 ZNF440Q8IYI8 595 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 WDR31Q8NA23 367 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 MAPK1IP1LQ8NDC0 245 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 OR9K2Q8NGE7 335 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 SMAP2Q8WU79 429 aaPredicted RBP10.45□□□□□ -0.74
LITAF-219ENST00000576334 PMM1Q92871 262 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 FBXW5Q969U6 566 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 SLC25A36Q96CQ1 311 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 KTI12Q96EK9 354 aaPredicted RBP10.45□□□□□ -0.74
LITAF-219ENST00000576334 COX4I2Q96KJ9 171 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 NAA11Q9BSU3 229 aaPredicted RBP10.45□□□□□ -0.74
LITAF-219ENST00000576334 PTDSS2Q9BVG9 487 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 ZNF385DQ9H6B1 395 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 BCL2L10Q9HD36 194 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 NPHS2Q9NP85 383 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 ZNF701Q9NV72 531 aaPredicted RBP10.45□□□□□ -0.74
LITAF-219ENST00000576334 ASB6Q9NWX5 421 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 MALT1Q9UDY8 824 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 GDF2Q9UK05 429 aaPredicted RBP10.45□□□□□ -0.74
LITAF-219ENST00000576334 ZNF232Q9UNY5 417 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 SLC25A15Q9Y619 301 aa10.45□□□□□ -0.74
LITAF-219ENST00000576334 FN1P02751 2386 aaKnown RBP10.44□□□□□ -0.74
LITAF-219ENST00000576334 ALPK2Q86TB3 2170 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 TMEM247A6NEH6 219 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 AQP7P3A6NL99 342 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 A8MVM7 634 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 C5orf58C9J3I9 102 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 FTCDNL1E5RQL4 147 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 M0R1B8 84 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 GPR171O14626 319 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 DNPH1O43598 174 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 EIF1BO60739 113 aaKnown RBP10.44□□□□□ -0.74
LITAF-219ENST00000576334 NPIPB7O75200 414 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 CNOT4O95628 575 aaKnown RBP10.44□□□□□ -0.74
LITAF-219ENST00000576334 GPIP06744 558 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 UQCRBP14927 111 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 FKBP2P26885 142 aaKnown RBP10.44□□□□□ -0.74
LITAF-219ENST00000576334 RPS5P46782 204 aaKnown RBP10.44□□□□□ -0.74
LITAF-219ENST00000576334 SELENOPP49908 381 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 ATP5J2P56134 94 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 COPZ1P61923 177 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 CDK6Q00534 326 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 FADDQ13158 208 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 SQLEQ14534 574 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 AAED1Q7RTV5 226 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 BIVMQ86UB2 503 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 BBS10Q8TAM1 723 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 HTRA1Q92743 480 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 MUCL1Q96DR8 90 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 MAGEB18Q96M61 343 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 MUS81Q96NY9 551 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 CPPED1Q9BRF8 314 aaPredicted RBP10.44□□□□□ -0.74
LITAF-219ENST00000576334 NGBQ9NPG2 151 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 MED4Q9NPJ6 270 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 CISD1Q9NZ45 108 aaKnown RBP10.44□□□□□ -0.74
LITAF-219ENST00000576334 UPB1Q9UBR1 384 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.44□□□□□ -0.74
LITAF-219ENST00000576334 IFT52Q9Y366 437 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 TLN2Q9Y4G6 2542 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 NAV3Q8IVL0 2385 aa10.44□□□□□ -0.74
LITAF-219ENST00000576334 IGKV1D-42A0A075B6H8 117 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 A0A1B0GWA3 101 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 A0A1W2PP18 115 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 HMGB1P1B2RPK0 211 aaPredicted RBP10.43□□□□□ -0.74
LITAF-219ENST00000576334 E7EQL1 145 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 OVOL3O00110 214 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 TPST2O60704 377 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 OPN1SWP03999 348 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 CDH11P55287 796 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 MTPNP58546 118 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 RPS4XP62701 263 aaKnown RBP10.43□□□□□ -0.74
LITAF-219ENST00000576334 TNK1Q13470 666 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 SCARB2Q14108 478 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 HIKESHIQ53FT3 197 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 RUNDC3AQ59EK9 446 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 TMEM225Q6GV28 225 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 REEP3Q6NUK4 255 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 PRSS57Q6UWY2 283 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 CREB3L2Q70SY1 520 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 PTOV1Q86YD1 416 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 EPHX4Q8IUS5 362 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 TAAR8Q969N4 342 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 RAD21L1Q9H4I0 556 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 CXorf56Q9H5V9 222 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 THUMPD1Q9NXG2 353 aaKnown RBP10.43□□□□□ -0.74
LITAF-219ENST00000576334 TAS2R16Q9NYV7 291 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 SLC9A8Q9Y2E8 581 aa10.43□□□□□ -0.74
LITAF-219ENST00000576334 HEATR1Q9H583 2144 aaKnown RBP10.43□□□□□ -0.74
LITAF-219ENST00000576334 CSPG4Q6UVK1 2322 aa10.42□□□□□ -0.74
LITAF-219ENST00000576334 PLCE1Q9P212 2302 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms