RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SERHL2Q9H4I8 314 aa14□□□□□ -0.17
CTDNEP1-211ENST00000575783 NTN4Q9HB63 628 aa14□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZDHHC18Q9NUE0 388 aa14□□□□□ -0.17
CTDNEP1-211ENST00000575783 TMED7Q9Y3B3 224 aa14□□□□□ -0.17
CTDNEP1-211ENST00000575783 CORINQ9Y5Q5 1042 aa14□□□□□ -0.17
CTDNEP1-211ENST00000575783 A0A0G2JMP0 313 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 A0A0X1KG70 313 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 TMEM72A0PK05 275 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 M0R233 179 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 PIP5K1BO14986 540 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 PLPP2O43688 288 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 AKR7A3O95154 331 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 C6orf47O95873 294 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 IGKV3-15P01624 115 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 CBR1P16152 277 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 HPCAL1P37235 193 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 ALDH3B1P43353 468 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 SELENOPP49908 381 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 GALNTL6Q49A17 601 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 LIPMQ5VYY2 423 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 EMBQ6PCB8 327 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 LINGO2Q7L985 606 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 HMGN2P46Q86SG4 172 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 FAM169BQ8N8A8 192 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 OR4M2Q8NGB6 313 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 RNF217Q8TC41 542 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 PMM1Q92871 262 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 YIPF5Q969M3 257 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 FCRL1Q96LA6 429 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 MRPL37Q9BZE1 423 aaKnown RBP13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 MS4A5Q9H3V2 200 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 CRLF2Q9HC73 371 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 MOV10Q9HCE1 1003 aaKnown RBP13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 ATP6V1HQ9UI12 483 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 PCDHGB4Q9UN71 923 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 FIS1Q9Y3D6 152 aa13.99□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZC3H12DA2A288 527 aaKnown RBP13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 SCAMP2O15127 329 aaKnown RBP13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 CFLARO15519 480 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 UPK3AO75631 287 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 PRSS23O95084 383 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 LINC00032P0C843 101 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 BCKDHAP12694 445 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 MATN1P21941 496 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 SEC24CP53992 1094 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZP4Q12836 540 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 CEACAM7Q14002 265 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 CFAP157Q5JU67 520 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 TMEM225Q6GV28 225 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 FRMD7Q6ZUT3 714 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 PSMA8Q8TAA3 256 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 MAGEE2Q8TD90 523 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZNF317Q96PQ6 595 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 SYT3Q9BQG1 590 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 SF3B5Q9BWJ5 86 aaKnown RBP13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZNF665Q9H7R5 613 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 NOX3Q9HBY0 568 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 MED29Q9NX70 200 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 SLC35A3Q9Y2D2 325 aa13.98□□□□□ -0.17
CTDNEP1-211ENST00000575783 H3BQF6 201 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZNF208O43345 1280 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 SCN2BO60939 215 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 NUDT17P0C025 328 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 SOAT1P35610 550 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 HTR3AP46098 478 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 POU3F1Q03052 451 aaPredicted RBP13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 MAD2L1BPQ15013 274 aaPredicted RBP13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 OR7A5Q15622 319 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 MSMPQ1L6U9 139 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 LSM12Q3MHD2 195 aaKnown RBP13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 DCAF12L2Q5VW00 463 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 NIPAL3Q6P499 406 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 TIFABQ6ZNK6 161 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 C16orf62Q7Z3J2 963 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 LCA5Q86VQ0 697 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 CLEC4FQ8N1N0 589 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 ARFGAP2Q8N6H7 521 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 SIGLECL1Q8N7X8 197 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 FAM71CQ8NEG0 241 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 SFXN5Q8TD22 340 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 MOAP1Q96BY2 351 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 NELFAQ9H3P2 528 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 OXSMQ9NWU1 459 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 OSGIN1Q9UJX0 560 aa13.97□□□□□ -0.17
CTDNEP1-211ENST00000575783 DUXAA6NLW8 204 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 CLDN24A6NM45 220 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 POM121CA8CG34 1229 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 J3QLI3 93 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 AP3D1O14617 1153 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 AK1P00568 194 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 GPIP06744 558 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 MYL2P10916 166 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 HOXB1P14653 301 aaPredicted RBP13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 NR4A1P22736 598 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 PRTN3P24158 256 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 TACR3P29371 465 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 ARR3P36575 388 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 CAPZA2P47755 286 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 EVX1P49640 407 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 POLR2HP52434 150 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms