RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CEACAM7Q14002 265 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 VEZF1Q14119 521 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 POU4F3Q15319 338 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 OR1Q1Q15612 314 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 CYP51A1Q16850 503 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 SWT1Q5T5J6 900 aaKnown RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 PPP4R4Q6NUP7 873 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 PAMR1Q6UXH9 720 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 HACD2Q6Y1H2 254 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 KIF18BQ86Y91 864 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 ARMC8Q8IUR7 673 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 EPHX4Q8IUS5 362 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 P3H2Q8IVL5 708 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 RP9Q8TA86 221 aaKnown RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 PIGXQ8TBF5 258 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 STK35Q8TDR2 534 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 TAAR8Q969N4 342 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 S100PBPQ96BU1 408 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 ZNF775Q96BV0 537 aaPredicted RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 MOGAT1Q96PD6 335 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 ELAC2Q9BQ52 826 aaKnown RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 OR10A4Q9H209 315 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 CXXC4Q9H2H0 198 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 CLEC4MQ9H2X3 399 aaPredicted RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 PIF1Q9H611 641 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 SERINC1Q9NRX5 453 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 MAN2C1Q9NTJ4 1040 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 MRGBPQ9NV56 204 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 NPAP1Q9NZP6 1156 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 C6orf203Q9P0P8 240 aaPredicted RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 SPIN1Q9Y657 262 aaPredicted RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 SETD2Q9BYW2 2564 aaPredicted RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 PRORSD1PA6NEY8 169 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 C5orf58C9J3I9 102 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 C16orf97H3BN30 126 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 DYNC1I1O14576 645 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 AKR7A3O95154 331 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 ATE1O95260 518 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 PLGP00747 810 aaPredicted RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 FKBP2P26885 142 aaKnown RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 CTBP2P56545 445 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 RGS8P57771 180 aaPredicted RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 SLC35A1P78382 337 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 LSM11P83369 360 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMG6-216ENST00000575176 CYLC2Q14093 348 aaPredicted RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 MAPRE2Q15555 327 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 OR7A5Q15622 319 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 TAB1Q15750 504 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 EXOC3L2Q2M3D2 409 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 IQCCQ4KMZ1 466 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 ALG10BQ5I7T1 473 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 SFRP5Q5T4F7 317 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 ANKRD34AQ69YU3 496 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 SLC46A3Q7Z3Q1 461 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 PATL1Q86TB9 770 aaKnown RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 TMEM200AQ86VY9 491 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 KRT73Q86Y46 540 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 TMEM123Q8N131 208 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 ZNF433Q8N7K0 673 aaPredicted RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 ADPRHL1Q8NDY3 354 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 OR9K2Q8NGE7 335 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 LILRB1Q8NHL6 650 aaPredicted RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 MFSD8Q8NHS3 518 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 DDIT4LQ96D03 193 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 BOD1Q96IK1 185 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 TACO1Q9BSH4 297 aaKnown RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 TMEM43Q9BTV4 400 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 SPATA5L1Q9BVQ7 753 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 PRRG4Q9BZD6 226 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 ACTR6Q9GZN1 396 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 FANCFQ9NPI8 374 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 MEPEQ9NQ76 525 aaPredicted RBP7.65□□□□□ -1.18
SMG6-216ENST00000575176 TIGARQ9NQ88 270 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 SLC7A10Q9NS82 523 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 ST6GALNAC2Q9UJ37 374 aa7.65□□□□□ -1.18
SMG6-216ENST00000575176 SVEP1Q4LDE5 3571 aa7.65□□□□□ -1.19
SMG6-216ENST00000575176 ARFGEF3Q5TH69 2177 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 CR1P17927 2039 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.64□□□□□ -1.19
SMG6-216ENST00000575176 TMEM247A6NEH6 219 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 M0R082 166 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 CHP2O43745 196 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 CNOT4O95628 575 aaKnown RBP7.64□□□□□ -1.19
SMG6-216ENST00000575176 PLAUP00749 431 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ADAP00813 363 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 IGHV3-9P01782 118 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 TSPAN19P0C672 248 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 TFPIP10646 304 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 HLA-DOBP13765 273 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 UQCRBP14927 111 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 CD53P19397 219 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 RPS5P46782 204 aaKnown RBP7.64□□□□□ -1.19
SMG6-216ENST00000575176 GSK3BP49841 420 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 SLC7A2P52569 658 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 OR2B6P58173 313 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 GNGT1P63211 74 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 FHL1Q13642 323 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ENTPD8Q5MY95 495 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 TMEM201Q5SNT2 666 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms