RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 EEF1A2Q05639 463 aaKnown RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 UBXN2BQ14CS0 331 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 PLPP4Q5VZY2 271 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 FAM71E1Q6IPT2 247 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 ZNF425Q6IV72 752 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 SEZ6L2Q6UXD5 910 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 Q6ZVL8 140 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 PGAP1Q75T13 922 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 MEPCEQ7L2J0 689 aaKnown RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 TMPRSS12Q86WS5 348 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 LNX2Q8N448 690 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 CAMKVQ8NCB2 501 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 OR10R2Q8NGX6 335 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 CASTOR1Q8WTX7 329 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 CPEB1Q9BZB8 566 aaKnown RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 ENKD1Q9H0I2 346 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 HRH4Q9H3N8 390 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 COA4Q9NYJ1 87 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 C13orf42A0A1B0GVH6 325 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 AQP8O94778 261 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 HPP00738 406 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 CEBPBP17676 345 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 PPM1AP35813 382 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 AKR1C3P42330 323 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 PRKXP51817 358 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 ODF4Q2M2E3 257 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 KLHL26Q53HC5 615 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 ENTPD8Q5MY95 495 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 Q6ZVU0 165 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 CAMKMTQ7Z624 323 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 NKAIN4Q8IVV8 208 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 OR1J4Q8NGS1 313 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 GOT1L1Q8NHS2 421 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 PDCD1LG2Q9BQ51 273 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 FAM83CQ9BQN1 747 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 TCEAL7Q9BRU2 100 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 PTDSS2Q9BVG9 487 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 ANKRD19PQ9H560 264 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 A4GALTQ9NPC4 353 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 RPS10P5Q9NQ39 176 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 PIPOXQ9P0Z9 390 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 B4GALT6Q9UBX8 382 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 FARSAQ9Y285 508 aaKnown RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 NTNG1Q9Y2I2 539 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 PCYT1BQ9Y5K3 369 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 A0A0D9SG52 128 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 TMEM218A2RU14 115 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 HMSDA8MTL9 139 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 SNRPGP15A8MWD9 76 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 SURF4O15260 269 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 SELENOFO60613 162 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 AKR7A3O95154 331 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 TBXA2RP21731 343 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 VAMP1P23763 118 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 IMPA1P29218 277 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 BDKRB2P30411 391 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 HCCSP53701 268 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 USF2Q15853 346 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 ZNF626Q68DY1 528 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 FAM83HQ6ZRV2 1179 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 KCTD9Q7L273 389 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 SSX9Q7RTT3 188 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 OR2W3Q7Z3T1 314 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 HSD11B1LQ7Z5J1 315 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 LRRTM1Q86UE6 522 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 VRK2Q86Y07 508 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 ADAMTS15Q8TE58 950 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 THEM6Q8WUY1 208 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 C3orf49Q96BT1 292 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 ZMYND19Q96E35 227 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-212ENST00000574799 IL17FQ96PD4 163 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 HHIPQ96QV1 700 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 IER2Q9BTL4 223 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 OR52D1Q9H346 318 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 UPB1Q9UBR1 384 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 PLEKHM1Q9Y4G2 1056 aa8.85□□□□□ -0.99
CCDC40-212ENST00000574799 TSPAN11A1L157 253 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 LY86O95711 162 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 SMIM6P0DI80 62 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 MGMTP16455 207 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 CBFBQ13951 182 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 COL9A2Q14055 689 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 TMEM255AQ5JRV8 349 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 AADACL4Q5VUY2 407 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 YOD1Q5VVQ6 348 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 FBXO46Q6PJ61 603 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 SLCO4C1Q6ZQN7 724 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 C17orf64Q86WR6 236 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 LSRQ86X29 649 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 SUN3Q8TAQ9 357 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 RXFP4Q8TDU9 374 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 GLYATL2Q8WU03 294 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 MRPL48Q96GC5 212 aaKnown RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 UBQLN3Q9H347 655 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 GAREM1Q9H706 876 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 WSB2Q9NYS7 404 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 PLAGL1Q9UM63 463 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 GON4LQ3T8J9 2241 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 PQLC2LA1A4F0 135 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms