RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 OR6S1Q8NH40 331 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 RNASE6Q93091 150 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 MCUR1Q96AQ8 359 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 SLC25A36Q96CQ1 311 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 STARD4Q96DR4 205 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 DNAJA3Q96EY1 480 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 PRRC1Q96M27 445 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 HS6ST2Q96MM7 605 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 SLC19A3Q9BZV2 496 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 KLHL4Q9C0H6 718 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 BCO1Q9HAY6 547 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 ACTR3BQ9P1U1 418 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 CLEC4AQ9UMR7 237 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 FAM32AQ9Y421 112 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 ARPC2O15144 300 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 MT-ATP6P00846 226 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 ITGA2P17301 1181 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 AGTR1P30556 359 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 UQCRC1P31930 480 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 RBM34P42696 430 aaKnown RBP11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 H3F3AP84243 136 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 TFF3Q07654 80 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 TRIM25Q14258 630 aaKnown RBP11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 OTUD3Q5T2D3 398 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 SP5Q6BEB4 398 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 TMEM225Q6GV28 225 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 ABLIM2Q6H8Q1 611 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 VWA1Q6PCB0 445 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 LINC00114Q6XXX2 140 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 GDF7Q7Z4P5 450 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 BTLAQ7Z6A9 289 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 GALNT5Q7Z7M9 940 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 LUZP2Q86TE4 346 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 TUSC5Q8IXB3 177 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 C10orf53Q8N6V4 93 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 PSD2Q9BQI7 771 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 BTBD10Q9BSF8 475 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 THTPAQ9BU02 230 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 FNDC11Q9BVV2 318 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 SF3B5Q9BWJ5 86 aaKnown RBP11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 RBM24Q9BX46 236 aaKnown RBP11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 PLSCR4Q9NRQ2 329 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 JKAMPQ9P055 326 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 RIMS3Q9UJD0 308 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 CORINQ9Y5Q5 1042 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 COL12A1Q99715 3063 aa11.38□□□□□ -0.59
TRAPPC1-206ENST00000573989 IGKV3D-15A0A087WSY6 115 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 AQP7P3A6NL99 342 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 A8MXE2 369 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 AKR7A3O95154 331 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 COX6B1P14854 86 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 MSX2P35548 267 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 SLC16A1P53985 500 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 BNIP1Q12981 228 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 PIN1Q13526 163 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 BEND4Q6ZU67 534 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 DHFR2Q86XF0 187 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 TAAR8Q969N4 342 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 KTI12Q96EK9 354 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 PYURFQ96I23 114 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 LRGUKQ96M69 825 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 SPOCK3Q9BQ16 436 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 PTDSS2Q9BVG9 487 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 ASPNQ9BXN1 380 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 TRIM15Q9C019 465 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 AMBRA1Q9C0C7 1298 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 PARPBPQ9NWS1 579 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 ELOVL5Q9NYP7 299 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 RASD1Q9Y272 281 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 B3GALT5Q9Y2C3 310 aa11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 NOSIPQ9Y314 301 aaKnown RBP11.37□□□□□ -0.59
TRAPPC1-206ENST00000573989 IGKV1D-42A0A075B6H8 117 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 HTR3EA5X5Y0 456 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 DNAJC8O75937 253 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 CGAP01215 116 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 HIST1H2ABP04908 130 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 NQO1P15559 274 aaKnown RBP11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 RHCEP18577 417 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 PCYT1AP49585 367 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 SORDQ00796 357 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 IL1RL1Q01638 556 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 TRAM2Q15035 370 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 H1FNTQ75WM6 255 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 HIST3H2AQ7L7L0 130 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 RRM2BQ7LG56 351 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 GPAT4Q86UL3 456 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 P3H2Q8IVL5 708 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 CCDC103Q8IW40 242 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 ZNF100Q8IYN0 542 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 OFCC1Q8IZS5 231 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 TMEM99Q8N816 258 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 SCAIQ8N9R8 606 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 ADPRHL1Q8NDY3 354 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 TMEM239Q8WW34 195 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 HIST1H2ACQ93077 130 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 ASB9Q96DX5 294 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 OPN3Q9H1Y3 402 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 C12orf49Q9H741 205 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 A4GNTQ9UNA3 340 aa11.36□□□□□ -0.59
TRAPPC1-206ENST00000573989 MED31Q9Y3C7 131 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms