RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 NKX2-2O95096 273 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 NDUFB2O95178 105 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 CBX7O95931 251 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 IGKV1D-16P01601 117 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 PVRP15151 417 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 ZNF10P21506 573 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-206ENST00000573852 DPP4P27487 766 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 DIO1P49895 249 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 PPP2CBP62714 309 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 PPP2CAP67775 309 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 PON3Q15166 354 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 GXYLT1Q4G148 440 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 FAM69AQ5T7M9 428 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 LINC00114Q6XXX2 140 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 FCRLAQ7L513 359 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 ZNF433Q8N7K0 673 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-206ENST00000573852 OR52R1Q8NGF1 315 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 TSACCQ96A04 125 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-206ENST00000573852 CTHRC1Q96CG8 243 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 OMA1Q96E52 524 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 RADILQ96JH8 1075 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 NMNAT3Q96T66 252 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 CHIAQ9BZP6 476 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 TRIM2Q9C040 744 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 NANSQ9NR45 359 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 REV3LO60673 3130 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 A0A087WV48 116 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 IFITM5A6NNB3 132 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 ZNF879B4DU55 563 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 H0Y8X5 98 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 ZNF749O43361 778 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 TGM6O95932 706 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 APODP05090 189 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 ADPRHP54922 357 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 KIRREL2Q6UWL6 708 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 PMM1Q92871 262 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 CMTM3Q96MX0 182 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 DDOQ99489 341 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 RBCK1Q9BYM8 510 aa17.49■□□□□ 0.39
SCARF1-206ENST00000573852 TICRRQ7Z2Z1 1910 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 OR6C74A6NCV1 312 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 CD1AP06126 327 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 PTHLHP12272 177 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 ACTR1BP42025 376 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 NANOS3P60323 173 aaKnown RBP17.48■□□□□ 0.39
SCARF1-206ENST00000573852 ACTR1AP61163 376 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 FAM53BQ14153 422 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 AANATQ16613 207 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 OR2T4Q8NH00 348 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 HMGB4Q8WW32 186 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 FAM3CQ92520 227 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 SEC22CQ9BRL7 303 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 EMC3Q9P0I2 261 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 NUP50Q9UKX7 468 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 PPIEQ9UNP9 301 aaKnown RBP17.48■□□□□ 0.39
SCARF1-206ENST00000573852 GABARAPH6UMI1 98 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 ARPC1BO15143 372 aaKnown RBP17.48■□□□□ 0.39
SCARF1-206ENST00000573852 MYOGP15173 224 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 RAD52P43351 418 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 PSG6Q00889 435 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 RPL6Q02878 288 aaKnown RBP17.48■□□□□ 0.39
SCARF1-206ENST00000573852 GRAMD2AQ8IUY3 354 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 LSMEM1Q8N8F7 131 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 NPEPL1Q8NDH3 523 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 RGP1Q92546 391 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-206ENST00000573852 ANKRD9Q96BM1 317 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-206ENST00000573852 HSPA12BQ96MM6 686 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 ZFYVE21Q9BQ24 234 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 C1QTNF7Q9BXJ2 289 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 NPDC1Q9NQX5 325 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-206ENST00000573852 POLE3Q9NRF9 147 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 ACTR10Q9NZ32 417 aa17.48■□□□□ 0.39
SCARF1-206ENST00000573852 OR6C68A6NDL8 312 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 PRR32B1ATL7 298 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 AIPO00170 330 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 HRGP04196 525 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 GRPRP30550 384 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 LSSP48449 732 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 APOOLQ6UXV4 268 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 SLC43A2Q8N370 569 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 OR6K6Q8NGW6 343 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 MSANTD3Q96H12 275 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 SPACA6W5XKT8 324 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 ARHGEF17Q96PE2 2063 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-206ENST00000573852 OR5K3A6NET4 321 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 ANKRD61A6NGH8 418 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 KRT33AO76009 404 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 SPI1P17947 270 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 RPL4P36578 427 aaKnown RBP17.47■□□□□ 0.39
SCARF1-206ENST00000573852 PTH2RP49190 550 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 TSPAN5P62079 268 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 RPS15P62841 145 aaKnown RBP17.47■□□□□ 0.39
SCARF1-206ENST00000573852 TCTE1Q5JU00 501 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 FAAP20Q6NZ36 180 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 CA13Q8N1Q1 262 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 RNF166Q96A37 237 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-206ENST00000573852 GPR174Q9BXC1 333 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 LIN7BQ9HAP6 207 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 KLHL9Q9P2J3 617 aa17.47■□□□□ 0.39
SCARF1-206ENST00000573852 EML5Q05BV3 1969 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms