RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 NANOGNBQ7Z5D8 188 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 IGFN1Q86VF2 1251 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 PSD4Q8NDX1 1056 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 JAM3Q9BX67 310 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 MED20Q9H944 212 aa26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 CHCHD2Q9Y6H1 151 aaPredicted RBP26.42■■□□□ 1.82
CTDNEP1-208ENST00000573600 PCNX2A6NKB5 2137 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 NR4A1P22736 598 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 ATP6V1E1P36543 226 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 AQP2P41181 271 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 ETV1P50549 477 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 CHAF1BQ13112 559 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 ALG10Q5BKT4 473 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 MAMDC2Q7Z304 686 aaPredicted RBP26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 FAM98AQ8NCA5 519 aaKnown RBP26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 DEFB124Q8NES8 71 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 OR52E2Q8NGJ4 325 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 MOSPD2Q8NHP6 518 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 TNFRSF10DQ9UBN6 386 aa26.41■■□□□ 1.82
CTDNEP1-208ENST00000573600 ETV2O00321 342 aaPredicted RBP26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 IMPA2O14732 288 aa26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 TNFSF15O95150 251 aa26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 SCG5P05408 212 aa26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 HIST1H1CP16403 213 aaKnown RBP26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 AQP6Q13520 282 aa26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 FAM69AQ5T7M9 428 aa26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 IL20RBQ6UXL0 311 aa26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 LRRC75AQ8NAA5 344 aa26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 HCAR1Q9BXC0 346 aa26.4■■□□□ 1.82
CTDNEP1-208ENST00000573600 CCRL2O00421 344 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 BCL10O95999 233 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 IGHA1P01876 353 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 CD14P08571 375 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 DLSTP36957 453 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 ZNF41P51814 821 aaPredicted RBP26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 MAP2K6P52564 334 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 KHDRBS1Q07666 443 aaKnown RBP eCLIP26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 GXYLT1Q4G148 440 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 KLHL12Q53G59 568 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 C1orf140Q5VVS0 124 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 OR4F15Q8NGB8 312 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 OR6S1Q8NH40 331 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 TEAD3Q99594 435 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 KATNB1Q9BVA0 655 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 FBXL4Q9UKA2 621 aa26.39■■□□□ 1.82
CTDNEP1-208ENST00000573600 OR2T1O43869 369 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 APOL3O95236 402 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 SLC2A5P22732 501 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 WNT4P56705 351 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 TSTQ16762 297 aaKnown RBP26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 SLC25A53Q5H9E4 307 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 PAQR6Q6TCH4 344 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 OR4K13Q8NH42 304 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 OPALINQ96PE5 141 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 PTDSS2Q9BVG9 487 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 IRF2BPLQ9H1B7 796 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 HAO2Q9NYQ3 351 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 ADAM18Q9Y3Q7 739 aa26.39■■□□□ 1.81
CTDNEP1-208ENST00000573600 ZC3H12DA2A288 527 aaKnown RBP26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 B4DXG7 233 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 AIREO43918 545 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 RAD1O60671 282 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 AHSA1O95433 338 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 RPS7P62081 194 aaKnown RBP26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 ERVK-25P63136 954 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 MLLT11Q13015 90 aaPredicted RBP26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 SPCS2Q15005 226 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 TMEM156Q8N614 296 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 CYB561A3Q8NBI2 242 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 SDR9C7Q8NEX9 313 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 MRGPRX4Q96LA9 322 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 FRMD6Q96NE9 622 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 COL25A1Q9BXS0 654 aaPredicted RBP26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 OR51V1Q9H2C8 321 aa26.38■■□□□ 1.81
CTDNEP1-208ENST00000573600 CCDC182A6NF36 153 aa26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 NBL1P41271 181 aa26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 CTXN1P60606 82 aa26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 RPL18Q07020 188 aaKnown RBP26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 SHFQ7M4L6 423 aa26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 OR51G2Q8NGK0 314 aa26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 ZFAND2BQ8WV99 257 aa26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 KISS1RQ969F8 398 aaPredicted RBP26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 ISYNA1Q9NPH2 558 aa26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 KLHL1Q9NR64 748 aa26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 P4HTMQ9NXG6 502 aa26.37■■□□□ 1.81
CTDNEP1-208ENST00000573600 FAM47E-STBD1D6RA91 191 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 J3QRE1 110 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 TERTO14746 1132 aaKnown RBP26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 ZNF208O43345 1280 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 FTH1P19P0C7X4 201 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 LIMS3P0CW19 117 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 LIMS4P0CW20 117 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 ZNF182P17025 639 aaPredicted RBP26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 POU4F2Q12837 409 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 TIMM50Q3ZCQ8 353 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 EMC4Q5J8M3 183 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 C19orf48Q6RUI8 117 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 ARSKQ6UWY0 536 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 OR2M3Q8NG83 312 aa26.36■■□□□ 1.81
CTDNEP1-208ENST00000573600 VDAC3Q9Y277 283 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms