RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TMPRSS3P57727 454 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 OR2B8PP59922 312 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 SRSF3P84103 164 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 ID2Q02363 134 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 C2orf80Q0P641 193 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 FOXL1Q12952 345 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 TPBGQ13641 420 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 HLFQ16534 295 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 KCNMB1Q16558 191 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 CTF1Q16619 201 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 HAGHQ16775 308 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 ATP6V1FQ16864 119 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 DUOXA1Q1HG43 343 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 RPEL1Q2QD12 228 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 CCDC58Q4VC31 144 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 GCSAMLQ5JQS6 135 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC35D3Q5M8T2 416 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 PDSS1Q5T2R2 415 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 OGFRL1Q5TC84 451 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 KIAA0895LQ68EN5 471 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 ACSM5Q6NUN0 579 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 MPZL3Q6UWV2 235 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 LRRN1Q6UXK5 716 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 HACD2Q6Y1H2 254 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 MBOAT1Q6ZNC8 495 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 Q6ZRG5 221 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 LINC00336Q6ZUF6 198 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 TMEM25Q86YD3 366 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 ATP6V1C2Q8NEY4 427 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 LYPD6BQ8NI32 183 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 DYNC2LI1Q8TCX1 351 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 STMN2Q93045 179 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 PTH2Q96A98 100 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 RPEQ96AT9 228 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 OMA1Q96E52 524 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 PCED1BQ96HM7 432 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 CEP170P1Q96L14 293 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 ZNF75AQ96N20 296 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 PRAP1Q96NZ9 151 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 IL12RB2Q99665 862 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 TM2D2Q9BX73 214 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 MRPS26Q9BYN8 205 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 RAB34Q9BZG1 259 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 METTL9Q9H1A3 318 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 ARMC7Q9H6L4 198 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 PATZ1Q9HBE1 687 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 CUTCQ9NTM9 273 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC38A7Q9NVC3 462 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 DUS2Q9NX74 493 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 VNN3Q9NY84 501 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 RSPH14Q9UHP6 348 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 CYB5R1Q9UHQ9 305 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 TINAGQ9UJW2 476 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 YARS2Q9Y2Z4 477 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 MRPS18BQ9Y676 258 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 NCANO14594 1321 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 UBN2Q6ZU65 1347 aa4.43□□□□□ -1.7
TOPBP1-210ENST00000572787 AK9Q5TCS8 1911 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 A0A0G2JLL6 359 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 EFCAB10A6NFE3 127 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 HIDE1A8MVS5 230 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 ZNF487B1APH4 448 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 hCG_2039718K7EN88 272 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 PLPP3O14495 311 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 EPHB6O15197 1021 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC31A1O15431 190 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 P2RX6O15547 441 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 MLNRO43193 412 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 KIAA0513O60268 411 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 STX10O60499 249 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 SRP72O76094 671 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 UTS2O95399 124 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 FGF19O95750 216 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 CD160O95971 181 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 PLAUP00749 431 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 ACP2P11117 423 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 CD36P16671 472 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 COMTP21964 271 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 LHCGRP22888 699 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 BDKRB1P46663 353 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 QARSP47897 775 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 UBE2MP61081 183 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 RPS15AP62244 130 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 SSBP2P81877 361 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 MRPS22P82650 360 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 CNTN1Q12860 1018 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 BSXQ3C1V8 233 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 PDZD11Q5EBL8 140 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 SOHLH1Q5JUK2 328 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 PPM1LQ5SGD2 360 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 RESP18Q5W5W9 173 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 STEAP1BQ6NZ63 245 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 DNM1P34Q6PK57 102 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 Q6ZSR3 168 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 ACOT7LQ6ZUV0 252 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 Q71RC1 249 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 NUFIP2Q7Z417 695 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 C5orf24Q7Z6I8 188 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 ITIH5Q86UX2 942 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms