RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ANAPC5Q9UJX4 755 aa4.74□□□□□ -1.65
SF3B3-214ENST00000572365 VWFP04275 2813 aa4.74□□□□□ -1.65
SF3B3-214ENST00000572365 A0A0A6YYC8 382 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 HNRNPCL2B2RXH8 293 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 TMEM114B3SHH9 223 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 I3L1I5 382 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 KPNA4O00629 521 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 GAPDHSO14556 408 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 PFDN6O15212 129 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 MFSD11O43934 449 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 NME2P1O60361 137 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 OR10H2O60403 315 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 GPR137BO60478 399 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 GMNNO75496 209 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 CDC123O75794 336 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 TNFAIP8O95379 198 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 PPP1R3DO95685 299 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 OR2T7P0C7T2 308 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 C8orf89P0DMQ9 161 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 ACHEP22303 614 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 PTAFRP25105 342 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 CRABP2P29373 138 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 PCGF2P35227 344 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 NSFP46459 744 aaKnown RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 THBS3P49746 956 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 NANOS2P60321 138 aaKnown RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 ATP6V0D1P61421 351 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 PPIAP62937 165 aaKnown RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 KCNJ2P63252 427 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 PLGLB1Q02325 96 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 RELAQ04206 551 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 PNRC1Q12796 327 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 VWC2Q2TAL6 325 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 HKDC1Q2TB90 917 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 LDLRAP1Q5SW96 308 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 OR7E24Q6IFN5 339 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 ZNF449Q6P9G9 518 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 LINC00299Q6ZSB3 139 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 CENPUQ71F23 418 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 TRMT10CQ7L0Y3 403 aaKnown RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 CPEB2Q7Z5Q1 589 aaKnown RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 LRRC34Q8IZ02 419 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 CLDN19Q8N6F1 224 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 CCNYQ8ND76 341 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 ANGPTL6Q8NI99 470 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 SLC22A8Q8TCC7 542 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 BLOC1S5Q8TDH9 187 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 RNASE6Q93091 150 aaKnown RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 LYZL4Q96KX0 146 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 SERPINB12Q96P63 405 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 CSPG4P5Q96PW8 444 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 VPS35Q96QK1 796 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 TRIB3Q96RU7 358 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 CYTH2Q99418 400 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 FMO2Q99518 471 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 BEX2Q9BXY8 128 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 NDEL1Q9GZM8 345 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 OR52A5Q9H2C5 316 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 NHEJ1Q9H9Q4 299 aaPredicted RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 DEPPQ9NTK1 212 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 NMRK1Q9NWW6 199 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 NXT1Q9UKK6 140 aaKnown RBP4.73□□□□□ -1.65
SF3B3-214ENST00000572365 GRIP1Q9Y3R0 1128 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 ANGPTL3Q9Y5C1 460 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 HEBP2Q9Y5Z4 205 aa4.73□□□□□ -1.65
SF3B3-214ENST00000572365 GLYATL1P3A0A0U1RQE8 302 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ATP6AP2A0A1C7CYW4 349 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 EEF1E1-BLOC1S5C9J1V9 151 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 TRIM77I1YAP6 450 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 M0QX08 132 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 PGRMC1O00264 195 aaKnown RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 FBP2O00757 339 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 EEF1E1O43324 174 aaKnown RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 SERPINB7O75635 380 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 TRMUO75648 421 aaKnown RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ATP6AP2O75787 350 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 GNA14O95837 355 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 CLPTM1O96005 669 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 FAM157CP0CG43 387 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ICAM2P13598 275 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ZNF23P17027 643 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 AHRP35869 848 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 MAGEA1P43355 309 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 CYB561P49447 251 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 MMP15P51511 669 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 HNRNPFP52597 415 aaKnown RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 DCDC1P59894 354 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 ESRRGP62508 458 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 CAV1Q03135 178 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 HSPA14Q0VDF9 509 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 TRAP1Q12931 704 aaKnown RBP4.72□□□□□ -1.65
SF3B3-214ENST00000572365 PLA2G7Q13093 441 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 SCARB2Q14108 478 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 VEZF1Q14119 521 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 KRT81Q14533 505 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 RGS21Q2M5E4 152 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 SLC25A35Q3KQZ1 300 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 FAM174BQ3ZCQ3 159 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 DNAL1Q4LDG9 190 aa4.72□□□□□ -1.65
SF3B3-214ENST00000572365 C1orf185Q5T7R7 199 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms