RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 PRODH2Q9UF12 536 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 MRTO4Q9UKD2 239 aaKnown RBP14.89□□□□□ -0.03
RAB40B-206ENST00000571995 MPDZO75970 2070 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 SERINC4A6NH21 518 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 POLR1CO15160 346 aaPredicted RBP14.89□□□□□ -0.03
RAB40B-206ENST00000571995 FMO6PO60774 539 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 SBK2P0C263 348 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 LIPCP11150 499 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 ZNF823P16415 610 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 GIFP27352 417 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 BTBD16Q32M84 506 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 OR2L13Q8N349 312 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 CBX7O95931 251 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 PLATP00750 562 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 IGHV4-34P06331 123 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 SLC6A19Q695T7 634 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 SSX6Q7RTT6 188 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 TMED4Q7Z7H5 227 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 EID2Q8N6I1 236 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 NPRL2Q8WTW4 380 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 PPP1R14BQ96C90 147 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 ZNF486Q96H40 463 aaPredicted RBP14.89□□□□□ -0.03
RAB40B-206ENST00000571995 MESP1Q9BRJ9 268 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 OR10A4Q9H209 315 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 ALKBH4Q9NXW9 302 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 CTSFQ9UBX1 484 aa14.89□□□□□ -0.03
RAB40B-206ENST00000571995 PLXNA4Q9HCM2 1894 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 BCAT2O15382 392 aaPredicted RBP14.88□□□□□ -0.03
RAB40B-206ENST00000571995 ALOX12BO75342 701 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 AHSA1O95433 338 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 DHFRP00374 187 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 ERGP11308 486 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 SLC25A25Q6KCM7 469 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 LRRN1Q6UXK5 716 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 LINC00346Q8IVM7 164 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 MR1Q95460 341 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 FAM46BQ96A09 425 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 C10orf90Q96M02 699 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 DERL3Q96Q80 235 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 GABRG3Q99928 467 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 THAP7Q9BT49 309 aaPredicted RBP14.88□□□□□ -0.03
RAB40B-206ENST00000571995 ZNF304Q9HCX3 659 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 HTR3EA5X5Y0 456 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 GIMD1P0DJR0 217 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 FOSL2P15408 326 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 CCDC190Q86UF4 302 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 BCORP1Q8N888 145 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 PTP4A1Q93096 173 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 MRPL48Q96GC5 212 aaKnown RBP14.88□□□□□ -0.03
RAB40B-206ENST00000571995 OR6C1Q96RD1 312 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 ARHGAP9Q9BRR9 750 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 FARSAQ9Y285 508 aaKnown RBP14.88□□□□□ -0.03
RAB40B-206ENST00000571995 HELZP42694 1942 aaKnown RBP14.88□□□□□ -0.03
RAB40B-206ENST00000571995 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 CPEP16870 476 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 MNDAP41218 407 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 NRG3P56975 720 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 DUSP8Q13202 625 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 ZNF628Q5EBL2 1059 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 ARHGAP11AQ6P4F7 1023 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 XKRXQ6PP77 449 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 GIMAP5Q96F15 307 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 ARHGDIGQ99819 225 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 IL20Q9NYY1 176 aa14.88□□□□□ -0.03
RAB40B-206ENST00000571995 IL9P15248 144 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 MAP3K8P41279 467 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 CXCL12P48061 93 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 GPR143P51810 404 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 OR7A5Q15622 319 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 MEP1BQ16820 701 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 FAM199XQ6PEV8 388 aaPredicted RBP14.87□□□□□ -0.03
RAB40B-206ENST00000571995 ZPLD1Q8TCW7 415 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 CCDC32Q9BV29 185 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 CACNG6Q9BXT2 260 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 UBE2ZQ9H832 354 aaPredicted RBP14.87□□□□□ -0.03
RAB40B-206ENST00000571995 CELSR3Q9NYQ7 3312 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 KIF26BQ2KJY2 2108 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 CTNSO60931 367 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 ZNF217O75362 1048 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 UTS2O95399 124 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 IGKV1D-16P01601 117 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 ZGLP1P0C6A0 271 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 MSL3P1P0C860 447 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 BCKDHBP21953 392 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 SLC6A9P48067 706 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 DNASE1L1P49184 302 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 ZNF136P52737 540 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 PSG6Q00889 435 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 PRICKLE4Q2TBC4 344 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 VASNQ6EMK4 673 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 FCRLAQ7L513 359 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 OR5H6Q8NGV6 325 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 GPER1Q99527 375 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 NOX4Q9NPH5 578 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 COQ3Q9NZJ6 369 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 TBC1D24Q9ULP9 559 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 A0A1W2PPL8 197 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 SSTR2P30874 369 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 LTBRP36941 435 aa14.87□□□□□ -0.03
RAB40B-206ENST00000571995 BICRALQ6AI39 1079 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms