RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 OR2B3O76000 313 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 OR7A10O76100 309 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 DHFRP00374 187 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 TCRBP04435 133 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 EDNRAP25101 427 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 RPS4XP62701 263 aaKnown RBP20.85■□□□□ 0.93
VPS53-211ENST00000571805 PITPNAQ00169 270 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 SLC35D3Q5M8T2 416 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 ESPNLQ6ZVH7 1005 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 SIAH3Q8IW03 269 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 DGAT2Q96PD7 388 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 SPATA2Q9UM82 520 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 CAMK2AQ9UQM7 478 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 EML5Q05BV3 1969 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 PSMB10P40306 273 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 SNRPD2P62316 118 aaKnown RBP20.85■□□□□ 0.93
VPS53-211ENST00000571805 ERVK-25P63136 954 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 FUT7Q11130 342 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 ISXQ2M1V0 245 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 ZDHHC1Q8WTX9 485 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 RASD2Q96D21 266 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 ZFP3Q96NJ6 502 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 ERVK-19Q9WJR5 959 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 MRPS33Q9Y291 106 aaKnown RBP20.85■□□□□ 0.93
VPS53-211ENST00000571805 MRPS7Q9Y2R9 242 aaKnown RBP20.85■□□□□ 0.93
VPS53-211ENST00000571805 NUBP2Q9Y5Y2 271 aa20.85■□□□□ 0.93
VPS53-211ENST00000571805 KNL1Q8NG31 2342 aa20.84■□□□□ 0.93
VPS53-211ENST00000571805 IGKV1D-42A0A075B6H8 117 aa20.84■□□□□ 0.93
VPS53-211ENST00000571805 RPS4Y2Q8TD47 263 aa20.84■□□□□ 0.93
VPS53-211ENST00000571805 HSPA12BQ96MM6 686 aa20.84■□□□□ 0.93
VPS53-211ENST00000571805 ORAI3Q9BRQ5 295 aa20.84■□□□□ 0.93
VPS53-211ENST00000571805 MED28Q9H204 178 aa20.84■□□□□ 0.93
VPS53-211ENST00000571805 OR10A5Q9H207 317 aa20.84■□□□□ 0.93
VPS53-211ENST00000571805 C2orf42Q9NWW7 574 aa20.84■□□□□ 0.93
VPS53-211ENST00000571805 MMP17Q9ULZ9 603 aa20.84■□□□□ 0.93
VPS53-211ENST00000571805 PIN1P1O15428 100 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 THEGLP0DJG4 465 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 CTSEP14091 401 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 MAOAP21397 527 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 HSD17B12Q53GQ0 312 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 RNASE12Q5GAN4 147 aaKnown RBP20.83■□□□□ 0.93
VPS53-211ENST00000571805 ZNF615Q8N8J6 731 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 HYLS1Q96M11 299 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 GPR27Q9NS67 375 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 OR10H1Q9Y4A9 318 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 PCDHGA9Q9Y5G4 932 aaKnown RBP20.83■□□□□ 0.93
VPS53-211ENST00000571805 TMEM131Q92545 1883 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 SRPX2O60687 465 aaPredicted RBP20.83■□□□□ 0.93
VPS53-211ENST00000571805 PGDP52209 483 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 KLHL26Q53HC5 615 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 ZSCAN1Q8NBB4 408 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 OR51Q1Q8NH59 317 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 MOSPD2Q8NHP6 518 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 RNF166Q96A37 237 aaPredicted RBP20.83■□□□□ 0.93
VPS53-211ENST00000571805 GFI1Q99684 422 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 ANKRD10Q9NXR5 420 aa20.83■□□□□ 0.93
VPS53-211ENST00000571805 BLACEA4D250 179 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 ERVH48-1M5A8F1 160 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 FABP7O15540 132 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 GSTZ1O43708 216 aaPredicted RBP20.82■□□□□ 0.92
VPS53-211ENST00000571805 GPRIN2O60269 458 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 GIFP27352 417 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.82■□□□□ 0.92
VPS53-211ENST00000571805 LINC01590Q5TEZ4 76 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 KIAA0895LQ68EN5 471 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 OR11H7Q8NGC8 314 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 GPX7Q96SL4 187 aaPredicted RBP20.82■□□□□ 0.92
VPS53-211ENST00000571805 SLC19A3Q9BZV2 496 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 NOX4Q9NPH5 578 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 SLCO1C1Q9NYB5 712 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 CD207Q9UJ71 328 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 HSPB11Q9Y547 144 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 ANKRD61A6NGH8 418 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 PRR32B1ATL7 298 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 IDSB3KWA1 339 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.82■□□□□ 0.92
VPS53-211ENST00000571805 CLDN4O14493 209 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 CTDSPLO15194 276 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 CLPSP04118 112 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 ANKRD34CP0C6C1 535 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 SRMP19623 302 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 CCR5P51681 352 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 IL10RAQ13651 578 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 ZNF684Q5T5D7 378 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 CREB3L2Q70SY1 520 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 OR6K6Q8NGW6 343 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 LGALS14Q8TCE9 139 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 PHYHIPQ92561 330 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 CACNG6Q9BXT2 260 aa20.82■□□□□ 0.92
VPS53-211ENST00000571805 TEX13CA0A0J9YWL9 993 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 B4DGG1 531 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 HTR2BP41595 481 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 GPLD1P80108 840 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 BAIAP2L2Q6UXY1 529 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 PRSS45Q7RTY3 260 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 C9orf62Q8N4C0 152 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 SNAPC3Q92966 411 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 ORAI1Q96D31 301 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 CMTM3Q96MX0 182 aa20.81■□□□□ 0.92
VPS53-211ENST00000571805 DERL3Q96Q80 235 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms