RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 MPP4Q96JB8 637 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 PSD2Q9BQI7 771 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 ZNF703Q9H7S9 590 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-209ENST00000571558 ZDHHC11Q9H8X9 412 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 RPS6KB2Q9UBS0 482 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 OSGIN1Q9UJX0 560 aa12.35□□□□□ -0.43
RPAIN-209ENST00000571558 MRPS18CQ9Y3D5 142 aaKnown RBP12.35□□□□□ -0.43
RPAIN-209ENST00000571558 MAGED1Q9Y5V3 778 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-209ENST00000571558 PCNX3Q9H6A9 2034 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 IGKV1D-42A0A075B6H8 117 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 A0A087WUJ7 227 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 A0A087WUU8 490 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 SH3PXD2BA1X283 911 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 A6NNC1 897 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 NPIPA2E9PIF3 369 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 NPIPA3F8WFD2 350 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 EFNA2O43921 213 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 WDR1O75083 606 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 E2F6O75461 281 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 GOSR1O95249 250 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 HEXAP06865 529 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 GLI4P10075 376 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 DPP4P27487 766 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 SRD5A2P31213 254 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 HOXC12P31275 282 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 IFNA8P32881 189 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 GCKP35557 465 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 RFC3P40938 356 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 HTR3AP46098 478 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 ZNF41P51814 821 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-209ENST00000571558 FOXF1Q12946 379 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 LAPTM4AQ15012 233 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 DAZAP2Q15038 168 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-209ENST00000571558 TRIP10Q15642 601 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 MICAQ29983 383 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 DEFB113Q30KQ7 82 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 FGD3Q5JSP0 725 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 LPCAT4Q643R3 524 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 TBPL2Q6SJ96 375 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 CLEC9AQ6UXN8 241 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 SLC22A16Q86VW1 577 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 ADGRG3Q86Y34 549 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 GTPBP8Q8N3Z3 284 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-209ENST00000571558 SVOPLQ8N434 492 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 TMEM255BQ8WV15 326 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 ACOT11Q8WXI4 607 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-209ENST00000571558 TMEM234Q8WY98 164 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 ZBTB8AQ96BR9 441 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 MRGPRX4Q96LA9 322 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 CIB1Q99828 191 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 TTTY12Q9BZ98 90 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 PNPLA3Q9NST1 481 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 VDAC3Q9Y277 283 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 VPS13CQ709C8 3753 aa12.34□□□□□ -0.43
RPAIN-209ENST00000571558 COL6A5A8TX70 2615 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 A0A0G2JNJ9 132 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 A0A1B0GVC2 190 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 ARRDC5A6NEK1 342 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 SAC3D1A6NKF1 404 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 SHISA8B8ZZ34 492 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 G3V2T6 193 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 IGHG3P01860 377 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 PNMTP11086 282 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 ZNF23P17027 643 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 PEX2P28328 305 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 APOBEC1P41238 236 aaKnown RBP12.33□□□□□ -0.44
RPAIN-209ENST00000571558 RBM34P42696 430 aaKnown RBP12.33□□□□□ -0.44
RPAIN-209ENST00000571558 POLR2HP52434 150 aaKnown RBP12.33□□□□□ -0.44
RPAIN-209ENST00000571558 B3GALT5-AS1P59052 145 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 PPIAP62937 165 aaKnown RBP12.33□□□□□ -0.44
RPAIN-209ENST00000571558 MERTKQ12866 999 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 GLYR1Q49A26 553 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-209ENST00000571558 HIPK1Q86Z02 1210 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 TMEM251Q8N6I4 163 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 ICA1LQ8NDH6 482 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 OR2B2Q9GZK3 357 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 GABARAPL1Q9H0R8 117 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 DEFB127Q9H1M4 99 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 RASSF4Q9H2L5 321 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 STOML1Q9UBI4 398 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 Q9UFV3 132 aa12.33□□□□□ -0.44
RPAIN-209ENST00000571558 TMED7-TICAM2A0A0A6YYA0 188 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 PDLIM1O00151 329 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 SUSD5O60279 629 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 NPIPB7O75200 414 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 HPNP05981 417 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 GABRA1P14867 456 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 ZNF17P17021 662 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 ZNF26P17031 533 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-209ENST00000571558 HK1P19367 917 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 PRKACGP22612 351 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 ADH6P28332 368 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 EIF1P41567 113 aaKnown RBP12.32□□□□□ -0.44
RPAIN-209ENST00000571558 UGT2B15P54855 530 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 EGR4Q05215 589 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 KEAP1Q14145 624 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 DCST1Q5T197 706 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 FAHD1Q6P587 224 aa12.32□□□□□ -0.44
RPAIN-209ENST00000571558 MBOAT2Q6ZWT7 520 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms