RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PIP5K1CO60331 668 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 FMO6PO60774 539 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 PRKD3O94806 890 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 DIRAS1O95057 198 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 ZNF682O95780 498 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 HPRP00739 348 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 CRHP06850 196 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 PNMTP11086 282 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 UQCRBP14927 111 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 UQCRC1P31930 480 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 IDUAP35475 653 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 CLK1P49759 484 aaKnown RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 FOXG1P55316 489 aaPredicted RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 KRTAP10-9P60411 292 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 NCALDP61601 193 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 MXRA7P84157 204 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 VLDLRP98155 873 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 LGALS3BPQ08380 585 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 RASGEF1BQ0VAM2 473 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 TSC22D1Q15714 1073 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 ELOA3BQ3SY89 546 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 OTUD3Q5T2D3 398 aaPredicted RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 OR2A2Q6IF42 318 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 ZNF613Q6PF04 617 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 ULK3Q6PHR2 472 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 C16orf89Q6UX73 402 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 TFAP2EQ6VUC0 442 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 MEX3BQ6ZN04 569 aaKnown RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 SLC46A3Q7Z3Q1 461 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 RANBP3LQ86VV4 465 aaPredicted RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 MEX3DQ86XN8 651 aaKnown RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 DMRTC2Q8IXT2 367 aaPredicted RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 LRRC17Q8N6Y2 441 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 ZIC4Q8N9L1 334 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 ELOA3Q8NG57 546 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 PFN4Q8NHR9 129 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 LINC01560Q8TB33 94 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 RNF217Q8TC41 542 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 TMEM255BQ8WV15 326 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 DNAJA4Q8WW22 397 aaPredicted RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 PROX1Q92786 737 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 RNASE6Q93091 150 aaKnown RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 FAM162AQ96A26 154 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 SLC25A36Q96CQ1 311 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 DDIT4LQ96D03 193 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 SLC47A1Q96FL8 570 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 SLC41A3Q96GZ6 507 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 C7orf34Q96L11 122 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 ZNF385AQ96PM9 386 aaKnown RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 RBM24Q9BX46 236 aaKnown RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 C12orf10Q9HB07 376 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 TMEM27Q9HBJ8 222 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 MEPEQ9NQ76 525 aaPredicted RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 PLSCR4Q9NRQ2 329 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 C20orf141Q9NUB4 165 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 DCAF13Q9NV06 445 aaKnown RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 ADPRHL2Q9NX46 363 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 PAQR5Q9NXK6 330 aaPredicted RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 KLHL28Q9NXS3 571 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 B3GAT1Q9P2W7 334 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 STOML1Q9UBI4 398 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 RPS6KB2Q9UBS0 482 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 RIMS3Q9UJD0 308 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 SLC13A4Q9UKG4 626 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 BAG5Q9UL15 447 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 SLC7A7Q9UM01 511 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 TRAPPC4Q9Y296 219 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 AP3M1Q9Y2T2 418 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 SPIN1Q9Y657 262 aaPredicted RBP6.2□□□□□ -1.42
SMG6-209ENST00000571442 F8P00451 2351 aa6.2□□□□□ -1.42
SMG6-209ENST00000571442 APCP25054 2843 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 TRAV36DV7A0A075B6V5 113 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 TRAPPC13A5PLN9 417 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 AQP7P3A6NL99 342 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 MS4A18H0YCH9 400 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 hCG_2039718K7EN88 272 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 M0R082 166 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 KPNA4O00629 521 aaPredicted RBP6.19□□□□□ -1.42
SMG6-209ENST00000571442 MSTNO14793 375 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 SIAH2O43255 324 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 AHSA1O95433 338 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 PLGP00747 810 aaPredicted RBP6.19□□□□□ -1.42
SMG6-209ENST00000571442 IGHV3-9P01782 118 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 YES1P07947 543 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 CD8BP10966 210 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 FCGR2AP12318 317 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 HLA-DOBP13765 273 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 FUT1P19526 365 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 GRPRP30550 384 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 SLC16A1P53985 500 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 CSNK2A1P68400 391 aaPredicted RBP6.19□□□□□ -1.42
SMG6-209ENST00000571442 SLC35A1P78382 337 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 BNIP1Q12981 228 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 SLC17A1Q14916 467 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 RNPS1Q15287 305 aaKnown RBP6.19□□□□□ -1.42
SMG6-209ENST00000571442 EXOC3L2Q2M3D2 409 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 MS4A18Q3C1V0 323 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 IFI44LQ53G44 452 aa6.19□□□□□ -1.42
SMG6-209ENST00000571442 SAMD4BQ5PRF9 694 aaKnown RBP6.19□□□□□ -1.42
SMG6-209ENST00000571442 ANKRD34AQ69YU3 496 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms