RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 FPR3P25089 353 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 CERS1P27544 350 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 POU1F1P28069 291 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TLX1P31314 330 aaPredicted RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TNFRSF4P43489 277 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 EIF2B2P49770 351 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 LIM2P55344 173 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TAS2R41P59536 307 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 KIAA1024LP59773 190 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 SUMO2P61956 95 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 RPS16P62249 146 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 LSM3P62310 102 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF91Q05481 1191 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ACSM1Q08AH1 577 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TSPAN31Q12999 210 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 GPR50Q13585 617 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 GANABQ14697 944 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 LARS2Q15031 903 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 NDUFA5Q16718 116 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TSTQ16762 297 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 WSCD2Q2TBF2 565 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF311Q5JNZ3 666 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 MANEAQ5SRI9 462 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 PRAMEF17Q5VTA0 474 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TBC1D3GQ6DHY5 549 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF544Q6NX49 715 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 SLC48A1Q6P1K1 146 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ZCCHC12Q6PEW1 402 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 METAP1DQ6UB28 335 aaPredicted RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 KIRREL2Q6UWL6 708 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TMPRSS11AQ6ZMR5 421 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 DEF8Q6ZN54 512 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 Q6ZPB1 254 aaPredicted RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 RASSF6Q6ZTQ3 369 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 CCDC190Q86UF4 302 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 AKAP14Q86UN6 197 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 SLC22A16Q86VW1 577 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 NRROSQ86YC3 692 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ADGRF3Q8IZF5 1079 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 RNF113BQ8IZP6 322 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 SLC34A3Q8N130 599 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 PARP16Q8N5Y8 322 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 NANOGP1Q8N7R0 232 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 GDPD1Q8N9F7 314 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 SCAIQ8N9R8 606 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 POC5Q8NA72 575 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF740Q8NDX6 193 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 OR2L3Q8NG85 312 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 GPR32P1Q8NGA4 272 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 OR4K5Q8NGD3 323 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 OR2A1Q8NGT9 310 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 PIGXQ8TBF5 258 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 SLC7A13Q8TCU3 470 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 HMGB4Q8WW32 186 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 RLN3Q8WXF3 142 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ACOT11Q8WXI4 607 aaPredicted RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 UFD1Q92890 307 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 MS4A6EQ96DS6 147 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 DAZAP1Q96EP5 407 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 C12orf66Q96MD2 445 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF578Q96N58 590 aaPredicted RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 PRAP1Q96NZ9 151 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 IL17FQ96PD4 163 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 MS4A4EQ96PG1 132 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ARHGDIGQ99819 225 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 DPH7Q9BTV6 452 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ACAT2Q9BWD1 397 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 BTBD1Q9H0C5 482 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 SPNS1Q9H2V7 528 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 OR51I1Q9H343 314 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 GLIPR2Q9H4G4 154 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 GAREM1Q9H706 876 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 LHX9Q9NQ69 397 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 INPP5EQ9NRR6 644 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 C14orf105Q9NVL8 296 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 NLGN3Q9NZ94 848 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TRPC4Q9UBN4 977 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 A4GNTQ9UNA3 340 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 LSM2Q9Y333 95 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 PCDHGB6Q9Y5F9 930 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 STON1Q9Y6Q2 735 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 USP9YO00507 2555 aaPredicted RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 MGAQ8IWI9 3026 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 HELZP42694 1942 aaKnown RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 IGHV1OR15-9A0A0B4J2B8 117 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 IGLON5A6NGN9 336 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 KDM4EB2RXH2 506 aaPredicted RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 DSCR3O14972 297 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 YKT6O15498 198 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 AQP9O43315 295 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ERI3O43414 337 aaKnown RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 PLRG1O43660 514 aaKnown RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 PRKYO43930 277 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 FMO6PO60774 539 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 CSO75390 466 aaKnown RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 KLF8O95600 359 aaPredicted RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 C1QCP02747 245 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 HLA-DPB1P04440 258 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TSPAN19P0C672 248 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 OR12D1P0DN82 309 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms