RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ZANQ9Y493 2812 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 ABCA1O95477 2261 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 PLCE1Q9P212 2302 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 CDHR4A6H8M9 788 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 CLDN24A6NM45 220 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 A8MV72 311 aaPredicted RBP16.34■□□□□ 0.21
LINC01238-205ENST00000567549 A8MVM7 634 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 KIAA1324LA8MWY0 1029 aaPredicted RBP16.34■□□□□ 0.21
LINC01238-205ENST00000567549 VSTM5A8MXK1 200 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 SDHDO14521 159 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 AP3D1O14617 1153 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 ITGA5P08648 1049 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 ZCCHC18P0CG32 403 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 EDNRAP25101 427 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 GTF2E2P29084 291 aaKnown RBP16.34■□□□□ 0.21
LINC01238-205ENST00000567549 APOBEC3AP31941 199 aaPredicted RBP16.34■□□□□ 0.21
LINC01238-205ENST00000567549 DSTNP60981 165 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 CHRFAM7AQ494W8 412 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 RNF220Q5VTB9 566 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 CXXC5Q7LFL8 322 aaKnown RBP16.34■□□□□ 0.21
LINC01238-205ENST00000567549 DYDC1Q8WWB3 177 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 FAM168AQ92567 244 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 SLC35B4Q969S0 331 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 ADAM19Q9H013 955 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 SLC7A10Q9NS82 523 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 TMEM45AQ9NWC5 275 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 ZIM2Q9NZV7 527 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 GDF2Q9UK05 429 aaPredicted RBP16.34■□□□□ 0.21
LINC01238-205ENST00000567549 GPR45Q9Y5Y3 372 aa16.34■□□□□ 0.21
LINC01238-205ENST00000567549 A0A0G2JPF8 293 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 AQP7P3A6NL99 342 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 HNRNPCL2B2RXH8 293 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 HNRNPCL3B7ZW38 293 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 E7EQL1 145 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 ZNF587BE7ETH6 402 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 PDLIM1O00151 329 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 HNRNPCL1O60812 293 aaKnown RBP16.33■□□□□ 0.2
LINC01238-205ENST00000567549 BCAS1O75363 584 aaPredicted RBP16.33■□□□□ 0.2
LINC01238-205ENST00000567549 ALDOCP09972 364 aaKnown RBP16.33■□□□□ 0.2
LINC01238-205ENST00000567549 HNRNPCL4P0DMR1 293 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 EPHA3P29320 983 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 LSP1P33241 339 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 CEACAM7Q14002 265 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 OR7A5Q15622 319 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 C5orf46Q6UWT4 87 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 GPAT4Q86UL3 456 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 HIPK1Q86Z02 1210 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 CADM2Q8N3J6 435 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 OR9K2Q8NGE7 335 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 OR52E4Q8NGH9 312 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 BOD1Q96IK1 185 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 CCDC134Q9H6E4 229 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 CDC42EP3Q9UKI2 254 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 RASD1Q9Y272 281 aa16.33■□□□□ 0.2
LINC01238-205ENST00000567549 PRAMEF27A3QJZ7 478 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 LIPT2A6NK58 231 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 ELOA3DA6NLF2 546 aaPredicted RBP16.32■□□□□ 0.2
LINC01238-205ENST00000567549 AHSA1O95433 338 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 BCHEP06276 602 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 GSNP06396 782 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 IMPDH2P12268 514 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 CR1P17927 2039 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 EFNA4P52798 201 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 SH3BGRP55822 239 aaPredicted RBP16.32■□□□□ 0.2
LINC01238-205ENST00000567549 UBE2NP61088 152 aaKnown RBP16.32■□□□□ 0.2
LINC01238-205ENST00000567549 KRTAP1-1Q07627 177 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 LOXL1Q08397 574 aaPredicted RBP16.32■□□□□ 0.2
LINC01238-205ENST00000567549 MPP2Q14168 576 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 ELOA3BQ3SY89 546 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 TSPO2Q5TGU0 170 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 PRAMEF8Q5VWM4 474 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 PRAMEF7Q5VXH5 474 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 C11orf71Q6IPW1 123 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 HMGN2P46Q86SG4 172 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 MAPK1IP1LQ8NDC0 245 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 ELOA3Q8NG57 546 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 OR10H5Q8NGA6 315 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 PNPT1Q8TCS8 783 aaKnown RBP16.32■□□□□ 0.2
LINC01238-205ENST00000567549 STK35Q8TDR2 534 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 PROX1Q92786 737 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 DNAJA3Q96EY1 480 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 TEX37Q96LM6 180 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 MYOZ1Q9NP98 299 aaPredicted RBP16.32■□□□□ 0.2
LINC01238-205ENST00000567549 RPS6KB2Q9UBS0 482 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 LPAR3Q9UBY5 353 aa16.32■□□□□ 0.2
LINC01238-205ENST00000567549 ZNF443Q9Y2A4 671 aaPredicted RBP16.32■□□□□ 0.2
LINC01238-205ENST00000567549 DSPPQ9NZW4 1301 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 GMNCA6NCL1 334 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 UBDO15205 165 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 AKAP8O43823 692 aaKnown RBP16.31■□□□□ 0.2
LINC01238-205ENST00000567549 CRYAAP02489 173 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 ERCC1P07992 297 aaPredicted RBP16.31■□□□□ 0.2
LINC01238-205ENST00000567549 HOXB1P14653 301 aaPredicted RBP16.31■□□□□ 0.2
LINC01238-205ENST00000567549 CDKN2CP42773 168 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 STX1BP61266 288 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 SNRPD2P62316 118 aaKnown RBP16.31■□□□□ 0.2
LINC01238-205ENST00000567549 IRX1P78414 480 aaPredicted RBP16.31■□□□□ 0.2
LINC01238-205ENST00000567549 C6orf10Q5SRN2 563 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 HMBOX1Q6NT76 420 aa16.31■□□□□ 0.2
LINC01238-205ENST00000567549 TNFRSF13CQ96RJ3 184 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms