RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 DCAF13Q9NV06 445 aaKnown RBP11.04□□□□□ -0.64
RNF40-211ENST00000567365 ADA2Q9NZK5 511 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 KLHL9Q9P2J3 617 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 A4GNTQ9UNA3 340 aa11.04□□□□□ -0.64
RNF40-211ENST00000567365 AQP7P3A6NL99 342 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 ELOA3DA6NLF2 546 aaPredicted RBP11.03□□□□□ -0.64
RNF40-211ENST00000567365 CPSF4LA6NMK7 179 aaKnown RBP11.03□□□□□ -0.64
RNF40-211ENST00000567365 OR5F1O95221 314 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 SERPINA1P01009 418 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 GPIP06744 558 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 YES1P07947 543 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 EDNRAP25101 427 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 MSX2P35548 267 aaPredicted RBP11.03□□□□□ -0.64
RNF40-211ENST00000567365 SIRPAP78324 504 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 RASGEF1BQ0VAM2 473 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 ELOA3BQ3SY89 546 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 NHLRC1Q6VVB1 395 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 GDF7Q7Z4P5 450 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 CCDC103Q8IW40 242 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 TUSC5Q8IXB3 177 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 ARHGAP24Q8N264 748 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 FAM86B1Q8N7N1 296 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 TMEM99Q8N816 258 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 ZIC4Q8N9L1 334 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 ZNF610Q8N9Z0 462 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 ELOA3Q8NG57 546 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 SLC7A6OSQ96CW6 309 aaPredicted RBP11.03□□□□□ -0.64
RNF40-211ENST00000567365 SLC41A3Q96GZ6 507 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 C7orf34Q96L11 122 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 ZNF300Q96RE9 604 aaPredicted RBP11.03□□□□□ -0.64
RNF40-211ENST00000567365 TACO1Q9BSH4 297 aaKnown RBP11.03□□□□□ -0.64
RNF40-211ENST00000567365 AMBRA1Q9C0C7 1298 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 OPN3Q9H1Y3 402 aaPredicted RBP11.03□□□□□ -0.64
RNF40-211ENST00000567365 RPS6KB2Q9UBS0 482 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 FOXD3Q9UJU5 478 aaPredicted RBP11.03□□□□□ -0.64
RNF40-211ENST00000567365 EMC9Q9Y3B6 208 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 SNX13Q9Y5W8 968 aa11.03□□□□□ -0.64
RNF40-211ENST00000567365 NOTCH2Q04721 2471 aa11.02□□□□□ -0.64
RNF40-211ENST00000567365 TRAV36DV7A0A075B6V5 113 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 EEF1E1-BLOC1S5C9J1V9 151 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 FFAR1O14842 300 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 GSTA4O15217 222 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 EEF1E1O43324 174 aaKnown RBP11.02□□□□□ -0.65
RNF40-211ENST00000567365 AHSA1O95433 338 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 BGLAPP02818 100 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 SEMG1P04279 462 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 THRBP10828 461 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 CCKARP32238 428 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 SORDQ00796 357 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 PIN1Q13526 163 aaPredicted RBP11.02□□□□□ -0.65
RNF40-211ENST00000567365 SLC17A1Q14916 467 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 OR7A5Q15622 319 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 IFI44LQ53G44 452 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 FAM69AQ5T7M9 428 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 PPP4R4Q6NUP7 873 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 TFAP2EQ6VUC0 442 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 LUZP2Q86TE4 346 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 P3H2Q8IVL5 708 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 ZNF295-AS1Q8N0V1 137 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 PIGXQ8TBF5 258 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 GEMIN6Q8WXD5 167 aaKnown RBP11.02□□□□□ -0.65
RNF40-211ENST00000567365 LZICQ8WZA0 190 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 ZHX1-C8orf76Q96EF9 292 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 TPD52L3Q96J77 140 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 HSH2DQ96JZ2 352 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 MAN2C1Q9NTJ4 1040 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 ADPRHL2Q9NX46 363 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 GALNT8Q9NY28 637 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 B3GAT1Q9P2W7 334 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 SEC14L4Q9UDX3 406 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 MAGEL2Q9UJ55 1249 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 RIMS3Q9UJD0 308 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 PROCRQ9UNN8 238 aa11.02□□□□□ -0.65
RNF40-211ENST00000567365 ALPK2Q86TB3 2170 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 LOC102725191A0A1B0GVB3 256 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 ARPC2O15144 300 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 OR2T1O43869 369 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 AKR7A3O95154 331 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 PLGP00747 810 aaPredicted RBP11.01□□□□□ -0.65
RNF40-211ENST00000567365 IGF2P01344 180 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 TCN1P20061 433 aaPredicted RBP11.01□□□□□ -0.65
RNF40-211ENST00000567365 RPS5P46782 204 aaKnown RBP11.01□□□□□ -0.65
RNF40-211ENST00000567365 OR3A2P47893 321 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 CTBP2P56545 445 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 BNIP1Q12981 228 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 POU4F3Q15319 338 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 TMEM201Q5SNT2 666 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 OTUD3Q5T2D3 398 aaPredicted RBP11.01□□□□□ -0.65
RNF40-211ENST00000567365 PGM2L1Q6PCE3 622 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 MEX3BQ6ZN04 569 aaKnown RBP11.01□□□□□ -0.65
RNF40-211ENST00000567365 NKAIN4Q8IVV8 208 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 OFCC1Q8IZS5 231 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 GABRG1Q8N1C3 465 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 ADPRHL1Q8NDY3 354 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 FAM162AQ96A26 154 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 PRRC1Q96M27 445 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 MOGAT1Q96PD6 335 aa11.01□□□□□ -0.65
RNF40-211ENST00000567365 SF3B5Q9BWJ5 86 aaKnown RBP11.01□□□□□ -0.65
RNF40-211ENST00000567365 RBM24Q9BX46 236 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms