RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 PODNL1Q6PEZ8 512 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 CXXC5Q7LFL8 322 aaKnown RBP24.27■■□□□ 1.48
UBFD1-206ENST00000566669 AAED1Q7RTV5 226 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 WDR31Q8NA23 367 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 OR9K2Q8NGE7 335 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 ITCHQ96J02 903 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 MDFIQ99750 246 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 WDR55Q9H6Y2 383 aaPredicted RBP24.27■■□□□ 1.48
UBFD1-206ENST00000566669 IFT52Q9Y366 437 aa24.27■■□□□ 1.48
UBFD1-206ENST00000566669 A0A0G2JPF8 293 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 ELOA3DA6NLF2 546 aaPredicted RBP24.26■■□□□ 1.47
UBFD1-206ENST00000566669 HNRNPCL2B2RXH8 293 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 HNRNPCL3B7ZW38 293 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 HNRNPCL1O60812 293 aaKnown RBP24.26■■□□□ 1.47
UBFD1-206ENST00000566669 HNRNPCL4P0DMR1 293 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 APOBEC3AP31941 199 aaPredicted RBP24.26■■□□□ 1.47
UBFD1-206ENST00000566669 CRATP43155 626 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 DSTNP60981 165 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 IRX1P78414 480 aaPredicted RBP24.26■■□□□ 1.47
UBFD1-206ENST00000566669 CEACAM7Q14002 265 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 ELOA3BQ3SY89 546 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 TSPO2Q5TGU0 170 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 NXNQ6DKJ4 435 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 ANKRD42Q8N9B4 389 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 ELOA3Q8NG57 546 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 PNPT1Q8TCS8 783 aaKnown RBP24.26■■□□□ 1.47
UBFD1-206ENST00000566669 DNAJA3Q96EY1 480 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 MAELQ96JY0 434 aaKnown RBP24.26■■□□□ 1.47
UBFD1-206ENST00000566669 RAD21L1Q9H4I0 556 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 TPT1P8Q9HAU6 139 aa24.26■■□□□ 1.47
UBFD1-206ENST00000566669 SDR39U1Q9NRG7 319 aaPredicted RBP24.26■■□□□ 1.47
UBFD1-206ENST00000566669 CHD3Q12873 2000 aaKnown RBP24.26■■□□□ 1.47
UBFD1-206ENST00000566669 TMEM120BA0PK00 339 aa24.25■■□□□ 1.47
UBFD1-206ENST00000566669 ZC3H12DA2A288 527 aaKnown RBP24.25■■□□□ 1.47
UBFD1-206ENST00000566669 A8MV72 311 aaPredicted RBP24.25■■□□□ 1.47
UBFD1-206ENST00000566669 KRT33AO76009 404 aa24.25■■□□□ 1.47
UBFD1-206ENST00000566669 TFPTP0C1Z6 253 aa24.25■■□□□ 1.47
UBFD1-206ENST00000566669 LOXL1Q08397 574 aaPredicted RBP24.25■■□□□ 1.47
UBFD1-206ENST00000566669 OR7A5Q15622 319 aa24.25■■□□□ 1.47
UBFD1-206ENST00000566669 PRAMEF8Q5VWM4 474 aa24.25■■□□□ 1.47
UBFD1-206ENST00000566669 PRAMEF7Q5VXH5 474 aa24.25■■□□□ 1.47
UBFD1-206ENST00000566669 YAE1D1Q9NRH1 226 aa24.25■■□□□ 1.47
UBFD1-206ENST00000566669 TMEM45AQ9NWC5 275 aa24.25■■□□□ 1.47
UBFD1-206ENST00000566669 ATP23Q9Y6H3 246 aa24.25■■□□□ 1.47
UBFD1-206ENST00000566669 A0A1W2PR80 420 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 ACAA2P42765 397 aaKnown RBP24.24■■□□□ 1.47
UBFD1-206ENST00000566669 MVDP53602 400 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 ZNF836Q6ZNA1 936 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 CADM2Q8N3J6 435 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 TMEM99Q8N816 258 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 STK35Q8TDR2 534 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 SLC38A5Q8WUX1 472 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 SPATA9Q9BWV2 254 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 RLIMQ9NVW2 624 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 NKIRAS1Q9NYS0 192 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 FBXO9Q9UK97 447 aaPredicted RBP24.24■■□□□ 1.47
UBFD1-206ENST00000566669 RASD1Q9Y272 281 aa24.24■■□□□ 1.47
UBFD1-206ENST00000566669 ZNF443Q9Y2A4 671 aaPredicted RBP24.24■■□□□ 1.47
UBFD1-206ENST00000566669 AKR7A3O95154 331 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 BCHEP06276 602 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 NCF2P19878 526 aaPredicted RBP24.23■■□□□ 1.47
UBFD1-206ENST00000566669 EFNA4P52798 201 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 FOXG1P55316 489 aaPredicted RBP24.23■■□□□ 1.47
UBFD1-206ENST00000566669 WDR4P57081 412 aaKnown RBP24.23■■□□□ 1.47
UBFD1-206ENST00000566669 SPOCK1Q08629 439 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 GPAT4Q86UL3 456 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 ZIC4Q8N9L1 334 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 FAM168AQ92567 244 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 PROX1Q92786 737 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 TNFRSF13CQ96RJ3 184 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 KCNS3Q9BQ31 491 aa24.23■■□□□ 1.47
UBFD1-206ENST00000566669 MXRA5Q9NR99 2828 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 IGHV4-30-2A0A087WSY4 118 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 ZNF587BE7ETH6 402 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 C1QCP02747 245 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 ETFAP13804 333 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 HOXB1P14653 301 aaPredicted RBP24.22■■□□□ 1.47
UBFD1-206ENST00000566669 SH3BGRP55822 239 aaPredicted RBP24.22■■□□□ 1.47
UBFD1-206ENST00000566669 MAPK11Q15759 364 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 C3orf36Q3SXR2 165 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 CHRFAM7AQ494W8 412 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 C1orf140Q5VVS0 124 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 C5orf46Q6UWT4 87 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 VRK2Q86Y07 508 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 ANKK1Q8NFD2 765 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 MANSC1Q9H8J5 431 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 CDC42EP3Q9UKI2 254 aa24.22■■□□□ 1.47
UBFD1-206ENST00000566669 UBDO15205 165 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 GKN3PP0CG01 181 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 KITP10721 976 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 VLDLRP98155 873 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 FADDQ13158 208 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 C9orf135Q5VTT2 229 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 B3GLCTQ6Y288 498 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 MFSD8Q8NHS3 518 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 ZNF385AQ96PM9 386 aaKnown RBP24.21■■□□□ 1.47
UBFD1-206ENST00000566669 C1QTNF6Q9BXI9 259 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 BCL2L10Q9HD36 194 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 TMEM160Q9NX00 188 aa24.21■■□□□ 1.47
UBFD1-206ENST00000566669 ADPRHL2Q9NX46 363 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms